Gene Spro_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1500 
Symbol 
ID5604125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1634050 
End bp1634889 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content51% 
IMG OID640937032 
Producttranscriptional regulator, CadC 
Protein accessionYP_001477732 
Protein GI157369743 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATA GATTAAACGA TCACATCATT TTTGATGTGG ATACGGGCAC CCTGAGCCTA 
ACGGAGCTCT CTGATGACCC CATCTCTATT TCCAATCCTT CAAAGCGACT ACTGCTGCTA
TTGATTACCC ATCATGGTGA GGCAGTTGGC CGGGAAGTGA TATTCAAGAA GGTTTGGGAC
GATTATGGCA TGGTTTCTGG TAACAATAAT CTTAACCAGT GCGTGAGCAA GCTACGTCGG
GTAATTAAAA ACCTGGGCAT TGAGGAAGAG GTGATCGCCA CCGTACCCAA GGTCGGTTTT
ATGCTGCGCT ATGAAATAAT AGTTGAACAC TGTGACGGGC CGGAAAACAG CTTCACCGAC
GAAGAAACGT CTGTTATTCC GCATGCCTCT GTTCAACCGG AAATAGCATC ATCGGCCGGG
AAGCCGGGGA GCGTCGGGAC AGTGTATGCC GGCTATTCCC GACGTTGGTG GACGATAGCC
AGCATCGTCG CACTGGGGGT GATTATGCTG GTGGTGGCGA TTAGCTGCTA CCTCACCGGC
TCGGTTTCCC GGCAGGAGAT TTATTTGGGT AAGGCCAACA GCTGTAAGGT TTTCATGTCG
ATGCCCGGCG CTGCGGTTGC CGTCAGTGCC GGCCTGAGTC GTGACATTCT GGCCTATGCC
GCCCCGCAGA CGGCAGAGTG CAGTGGCGAC GAGTTCTTGT TGGTGGTGCG TAGTAACCAG
GTGCGCTCCT ACATTTCCGG TATTTCCCGG CTATTTTTCC TGCGTTGTCG GATTTTGCGT
GAGCACAGGG TCGAAATTTG TTCTGGTCTT GAAAGCGACA AAGCAGCAAT TATCAATTAA
 
Protein sequence
MKYRLNDHII FDVDTGTLSL TELSDDPISI SNPSKRLLLL LITHHGEAVG REVIFKKVWD 
DYGMVSGNNN LNQCVSKLRR VIKNLGIEEE VIATVPKVGF MLRYEIIVEH CDGPENSFTD
EETSVIPHAS VQPEIASSAG KPGSVGTVYA GYSRRWWTIA SIVALGVIML VVAISCYLTG
SVSRQEIYLG KANSCKVFMS MPGAAVAVSA GLSRDILAYA APQTAECSGD EFLLVVRSNQ
VRSYISGISR LFFLRCRILR EHRVEICSGL ESDKAAIIN