21 homologs were found in PanDaTox collection
for query gene Mnod_0713 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011894  Mnod_0713  Peptidoglycan-binding domain 1 protein  100 
 
 
276 aa  514  1.0000000000000001e-145  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.621682  n/a   
 
 
-
 
NC_010511  M446_1122  peptidoglycan binding domain-containing protein  53.72 
 
 
279 aa  190  2.9999999999999997e-47  Methylobacterium sp. 4-46  Bacteria  normal  0.429481  normal  0.843879 
 
 
-
 
NC_011757  Mchl_0710  Peptidoglycan-binding domain 1 protein  38.07 
 
 
250 aa  103  4e-21  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.296001 
 
 
-
 
NC_010172  Mext_0699  peptidoglycan binding domain-containing protein  37.5 
 
 
250 aa  98.2  1e-19  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4662  peptidoglycan binding domain-containing protein  38.64 
 
 
241 aa  88.2  2e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.486604 
 
 
-
 
NC_010725  Mpop_0672  Peptidoglycan-binding domain 1 protein  34.4 
 
 
245 aa  84  0.000000000000002  Methylobacterium populi BJ001  Bacteria  normal  normal  0.317968 
 
 
-
 
NC_009485  BBta_3046  hypothetical protein  31.72 
 
 
231 aa  79.7  0.00000000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1407  peptidoglycan binding domain-containing protein  49.18 
 
 
239 aa  65.5  0.0000000009  Xanthobacter autotrophicus Py2  Bacteria  normal  0.295856  normal 
 
 
-
 
NC_007778  RPB_3514  peptidoglycan binding domain-containing protein  28.22 
 
 
267 aa  63.2  0.000000005  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0652587  normal  0.321018 
 
 
-
 
NC_010581  Bind_1638  peptidoglycan binding domain-containing protein  27.68 
 
 
276 aa  57.4  0.0000003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.309377  normal  0.322514 
 
 
-
 
NC_007964  Nham_2622  peptidoglycan binding domain-containing protein  27.8 
 
 
201 aa  55.8  0.0000007  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0885  Peptidoglycan-binding domain 1 protein  27 
 
 
307 aa  53.5  0.000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1306  hypothetical protein  39.18 
 
 
374 aa  52.8  0.000007  Agrobacterium vitis S4  Bacteria  normal  0.340844  n/a   
 
 
-
 
NC_011004  Rpal_2064  Peptidoglycan-binding domain 1 protein  44.44 
 
 
233 aa  51.6  0.00002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1780  peptidoglycan binding domain-containing protein  40 
 
 
237 aa  50.4  0.00003  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0189708 
 
 
-
 
NC_007958  RPD_1945  peptidoglycan binding domain-containing protein  42.37 
 
 
266 aa  50.1  0.00004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0459891  normal  0.0921332 
 
 
-
 
NC_012850  Rleg_1011  Peptidoglycan-binding domain 1 protein  27.99 
 
 
317 aa  47.4  0.0002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.404081  normal 
 
 
-
 
NC_011830  Dhaf_4849  spore cortex-lytic enzyme  44.44 
 
 
228 aa  47  0.0003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0618  peptidoglycan binding domain-containing protein  44.44 
 
 
312 aa  46.6  0.0004  Sinorhizobium medicae WSM419  Bacteria  normal  0.773916  normal 
 
 
-
 
NC_011666  Msil_1669  Peptidoglycan-binding domain 1 protein  64.86 
 
 
228 aa  44.7  0.002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.428557 
 
 
-
 
NC_007406  Nwi_2220  hypothetical protein  36.36 
 
 
193 aa  43.9  0.003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
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