More than 300 homologs were found in PanDaTox collection
for query gene LACR_A08 on replicon NC_008503
Organism: Lactococcus lactis subsp. cremoris SK11



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008503  LACR_A08  nucleoid DNA-binding protein  100 
 
 
103 aa  204  4e-52  Lactococcus lactis subsp. cremoris SK11  Bacteria  hitchhiker  0.00440163  n/a   
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  48.45 
 
 
90 aa  86.7  1e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  47.42 
 
 
90 aa  85.5  2e-16  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_007644  Moth_0085  nucleoid protein Hbs  47.92 
 
 
91 aa  84.3  5e-16  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0539634  normal 
 
 
-
 
NC_008527  LACR_0525  nucleoid protein Hbs  46.94 
 
 
91 aa  84.3  5e-16  Lactococcus lactis subsp. cremoris SK11  Bacteria  decreased coverage  0.00046461  n/a   
 
 
-
 
NC_008531  LEUM_1290  nucleoid protein Hbs  46.94 
 
 
91 aa  83.2  0.000000000000001  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00000854913  n/a   
 
 
-
 
NC_008532  STER_1175  histone-like DNA-binding protein  46.94 
 
 
91 aa  82.8  0.000000000000001  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.000000211181  n/a   
 
 
-
 
NC_009253  Dred_0115  histone family protein DNA-binding protein  47.92 
 
 
95 aa  82.8  0.000000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.552761  n/a   
 
 
-
 
NC_008530  LGAS_0894  nucleoid DNA-binding protein  50 
 
 
91 aa  82  0.000000000000002  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  8.08972e-16  hitchhiker  0.000000000000265027 
 
 
-
 
NC_011830  Dhaf_0135  histone family protein DNA-binding protein  47.42 
 
 
91 aa  81.3  0.000000000000004  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00267128  n/a   
 
 
-
 
NC_009674  Bcer98_2403  histone family protein DNA-binding protein  46.39 
 
 
90 aa  80.9  0.000000000000005  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.00000000237544  n/a   
 
 
-
 
NC_011898  Ccel_3085  histone family protein DNA-binding protein  46.88 
 
 
91 aa  80.9  0.000000000000006  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000115471  n/a   
 
 
-
 
NC_012034  Athe_2511  histone family protein DNA-binding protein  48.96 
 
 
92 aa  80.9  0.000000000000006  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000006954  n/a   
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  46.39 
 
 
90 aa  80.5  0.000000000000007  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  46.39 
 
 
90 aa  80.5  0.000000000000007  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_011773  BCAH820_1604  DNA-binding protein HU  46.39 
 
 
90 aa  80.5  0.000000000000007  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000159132 
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  46.39 
 
 
90 aa  80.5  0.000000000000007  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  46.39 
 
 
90 aa  80.5  0.000000000000007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  46.39 
 
 
90 aa  80.5  0.000000000000007  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_009513  Lreu_0765  nucleoid protein Hbs  44.9 
 
 
91 aa  80.5  0.000000000000007  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000296782  n/a   
 
 
-
 
NC_009674  Bcer98_1233  histone family protein DNA-binding protein  46.39 
 
 
90 aa  80.5  0.000000000000007  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0133564  n/a   
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  46.39 
 
 
90 aa  80.5  0.000000000000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  46.39 
 
 
90 aa  80.5  0.000000000000007  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  46.39 
 
 
90 aa  80.5  0.000000000000007  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  46.39 
 
 
90 aa  80.5  0.000000000000007  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_002976  SERP1041  DNA-binding protein HU  45.36 
 
 
90 aa  79.3  0.00000000000001  Staphylococcus epidermidis RP62A  Bacteria  normal  0.436255  n/a   
 
 
-
 
NC_012034  Athe_0648  histone family protein DNA-binding protein  45.83 
 
 
91 aa  80.1  0.00000000000001  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000417185  n/a   
 
 
-
 
NC_009487  SaurJH9_1530  histone family protein DNA-binding protein  45.36 
 
 
90 aa  79.3  0.00000000000001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.277737  n/a   
 
 
-
 
NC_009632  SaurJH1_1560  histone family protein DNA-binding protein  45.36 
 
 
90 aa  79.3  0.00000000000001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.768925  n/a   
 
 
-
 
NC_011773  BCAH820_3740  DNA-binding protein HU  46.39 
 
 
90 aa  79.3  0.00000000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000145695 
 
 
-
 
NC_003909  BCE_3756  DNA-binding protein HU  46.39 
 
 
90 aa  79.3  0.00000000000002  Bacillus cereus ATCC 10987  Bacteria  unclonable  0.0000000000231467  n/a   
 
 
-
 
NC_005945  BAS3574  DNA-binding protein HU  46.39 
 
 
90 aa  79.3  0.00000000000002  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.0000000000204463  n/a   
 
 
-
 
NC_005957  BT9727_3473  DNA-binding protein HU  46.39 
 
 
90 aa  79.3  0.00000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  1.59147e-20  n/a   
 
 
-
 
NC_006274  BCZK3486  DNA-binding protein HU  46.39 
 
 
90 aa  79.3  0.00000000000002  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000148823  n/a   
 
 
-
 
NC_011772  BCG9842_B1474  DNA-binding protein HU  46.39 
 
 
90 aa  79.3  0.00000000000002  Bacillus cereus G9842  Bacteria  unclonable  0.000000000112809  hitchhiker  0.00000484208 
 
 
-
 
NC_007530  GBAA_3858  DNA-binding protein HU  46.39 
 
 
90 aa  79.3  0.00000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  unclonable  0.0000000000000587043  n/a   
 
 
-
 
NC_011658  BCAH187_A3778  DNA-binding protein HU  46.39 
 
 
90 aa  79.3  0.00000000000002  Bacillus cereus AH187  Bacteria  unclonable  0.000000000704337  n/a   
 
 
-
 
NC_011725  BCB4264_A3827  DNA-binding protein HU  46.39 
 
 
90 aa  79.3  0.00000000000002  Bacillus cereus B4264  Bacteria  unclonable  0.00000818253  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3494  histone family protein DNA-binding protein  45.36 
 
 
90 aa  77.8  0.00000000000005  Bacillus weihenstephanensis KBAB4  Bacteria  decreased coverage  0.00000668206  n/a   
 
 
-
 
NC_008346  Swol_0083  DNA-binding protein HU (DNA-binding protein II)  43.75 
 
 
90 aa  77.8  0.00000000000005  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0075  histone family protein DNA-binding protein  44.79 
 
 
91 aa  77.4  0.00000000000006  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1837  histone family protein DNA-binding protein  47.42 
 
 
90 aa  77.4  0.00000000000006  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00431989  n/a   
 
 
-
 
NC_011662  Tmz1t_2014  histone family protein DNA-binding protein  40.62 
 
 
90 aa  76.6  0.00000000000009  Thauera sp. MZ1T  Bacteria  decreased coverage  0.000105311  n/a   
 
 
-
 
NC_009997  Sbal195_3943  histone family protein DNA-binding protein  43.75 
 
 
90 aa  76.3  0.0000000000001  Shewanella baltica OS195  Bacteria  normal  0.37618  normal 
 
 
-
 
NC_013205  Aaci_0186  histone family protein DNA-binding protein  44.33 
 
 
90 aa  76.6  0.0000000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3817  histone family protein DNA-binding protein  43.75 
 
 
90 aa  76.3  0.0000000000001  Shewanella baltica OS185  Bacteria  normal  0.531766  n/a   
 
 
-
 
NC_011663  Sbal223_3761  histone family protein DNA-binding protein  43.75 
 
 
90 aa  76.3  0.0000000000001  Shewanella baltica OS223  Bacteria  normal  normal  0.768478 
 
 
-
 
NC_010718  Nther_0070  nucleoid protein Hbs  44.33 
 
 
92 aa  76.3  0.0000000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0240129  normal 
 
 
-
 
NC_009052  Sbal_0507  histone family protein DNA-binding protein  43.75 
 
 
90 aa  76.3  0.0000000000001  Shewanella baltica OS155  Bacteria  normal  0.0267079  n/a   
 
 
-
 
NC_010180  BcerKBAB4_5693  histone family protein DNA-binding protein  43.3 
 
 
90 aa  76.3  0.0000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0471576  normal  0.0346696 
 
 
-
 
NC_009438  Sputcn32_3325  histone family protein DNA-binding protein  43.75 
 
 
90 aa  76.3  0.0000000000001  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011777  BCAH820_B0184  DNA-binding protein HU 1  42.27 
 
 
90 aa  76.3  0.0000000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013171  Apre_0964  histone family protein DNA-binding protein  48.45 
 
 
92 aa  75.9  0.0000000000002  Anaerococcus prevotii DSM 20548  Bacteria  decreased coverage  0.00000000994236  n/a   
 
 
-
 
NC_011899  Hore_10570  histone family protein DNA-binding protein  42.45 
 
 
137 aa  75.5  0.0000000000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011655  BCAH187_C0183  DNA-binding protein HU 1  42.27 
 
 
90 aa  75.5  0.0000000000002  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000296943  hitchhiker  2.26878e-36 
 
 
-
 
NC_008783  BARBAKC583_0550  DNA-binding protein HU-beta  41.67 
 
 
92 aa  75.9  0.0000000000002  Bartonella bacilliformis KC583  Bacteria  normal  0.169626  n/a   
 
 
-
 
NC_008528  OEOE_1010  nucleoid protein Hbs  42.86 
 
 
91 aa  75.5  0.0000000000002  Oenococcus oeni PSU-1  Bacteria  normal  0.301873  n/a   
 
 
-
 
NC_009674  Bcer98_1763  histone family protein DNA-binding protein  48.98 
 
 
90 aa  75.5  0.0000000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.203917  n/a   
 
 
-
 
NC_008321  Shewmr4_0548  histone family protein DNA-binding protein  42.71 
 
 
90 aa  75.1  0.0000000000003  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1180  histone-like DNA-binding protein  41.67 
 
 
90 aa  74.7  0.0000000000004  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  2.95654e-16  n/a   
 
 
-
 
NC_008577  Shewana3_0547  histone family protein DNA-binding protein  42.71 
 
 
90 aa  74.7  0.0000000000004  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1181  histone family protein DNA-binding protein  41.41 
 
 
92 aa  74.7  0.0000000000004  Pelobacter propionicus DSM 2379  Bacteria  normal  0.42545  n/a   
 
 
-
 
NC_009524  PsycPRwf_1626  histone family protein DNA-binding protein  41.49 
 
 
90 aa  74.3  0.0000000000005  Psychrobacter sp. PRwf-1  Bacteria  unclonable  0.00000000000133039  hitchhiker  0.00000000638901 
 
 
-
 
NC_009831  Ssed_0600  histone family protein DNA-binding protein  41.67 
 
 
90 aa  73.9  0.0000000000006  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011775  BCG9842_0074  DNA-binding protein HU  43.3 
 
 
90 aa  73.9  0.0000000000007  Bacillus cereus G9842  Bacteria  unclonable  0.00000000000481156  n/a   
 
 
-
 
NC_004347  SO_0548  HU family DNA-binding protein  41.67 
 
 
90 aa  73.6  0.0000000000009  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010814  Glov_1926  histone family protein DNA-binding protein  44.79 
 
 
92 aa  73.6  0.0000000000009  Geobacter lovleyi SZ  Bacteria  unclonable  0.0000000201993  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2184  histone family protein DNA-binding protein  42.27 
 
 
90 aa  73.6  0.0000000000009  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.170143  n/a   
 
 
-
 
NC_011725  BCB4264_A2342  DNA-binding protein HU  42.27 
 
 
90 aa  72.8  0.000000000001  Bacillus cereus B4264  Bacteria  normal  0.868034  n/a   
 
 
-
 
NC_013385  Adeg_2069  histone family protein DNA-binding protein  40.62 
 
 
95 aa  72.8  0.000000000001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1064  DNA-binding protein HU  40.21 
 
 
91 aa  73.2  0.000000000001  Brucella ovis ATCC 25840  Bacteria  normal  0.203306  n/a   
 
 
-
 
NC_008254  Meso_1172  histone-like DNA-binding protein  38.14 
 
 
90 aa  73.2  0.000000000001  Chelativorans sp. BNC1  Bacteria  normal  0.856335  n/a   
 
 
-
 
NC_014148  Plim_1271  histone family protein DNA-binding protein  42.27 
 
 
171 aa  72.8  0.000000000001  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2983  DNA-binding protein HU  42.27 
 
 
90 aa  72.8  0.000000000001  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_1227  HU family DNA-binding protein  43.75 
 
 
90 aa  73.6  0.000000000001  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0000165625  normal 
 
 
-
 
NC_010506  Swoo_4353  histone family protein DNA-binding protein  40.62 
 
 
90 aa  73.6  0.000000000001  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_2407  DNA-binding protein HU  44.33 
 
 
90 aa  72.4  0.000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  0.020348  n/a   
 
 
-
 
NC_005945  BAS2213  DNA-binding protein HU  44.33 
 
 
90 aa  72.4  0.000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.519209  n/a   
 
 
-
 
NC_005957  BT9727_2152  DNA-binding protein HU  44.33 
 
 
90 aa  72.4  0.000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0274093  n/a   
 
 
-
 
NC_006274  BCZK2136  DNA-binding protein HU  44.33 
 
 
90 aa  72.4  0.000000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3398  histone family protein DNA-binding protein  40.62 
 
 
92 aa  72.8  0.000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000223697  n/a   
 
 
-
 
NC_011658  BCAH187_A2477  DNA-binding protein HU  44.33 
 
 
90 aa  72.4  0.000000000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2657  nucleoid protein Hbs  42.71 
 
 
91 aa  72.4  0.000000000002  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000194133  n/a   
 
 
-
 
NC_007530  GBAA_2377  DNA-binding protein HU  44.33 
 
 
90 aa  72.4  0.000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2395  DNA-binding protein HU  44.33 
 
 
90 aa  72.4  0.000000000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008322  Shewmr7_3482  histone family protein DNA-binding protein  41.67 
 
 
90 aa  72.8  0.000000000002  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009140  SNSL254_pSN254_0022  DNA-binding protein HU  40.21 
 
 
90 aa  72.4  0.000000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  hitchhiker  0.00102315  hitchhiker  0.000567997 
 
 
-
 
NC_007484  Noc_1772  histone-like DNA-binding protein  38.54 
 
 
90 aa  71.6  0.000000000003  Nitrosococcus oceani ATCC 19707  Bacteria  decreased coverage  0.000757515  n/a   
 
 
-
 
NC_011898  Ccel_2424  histone family protein DNA-binding protein  40.82 
 
 
91 aa  72  0.000000000003  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000000394497  n/a   
 
 
-
 
NC_008228  Patl_3133  histone-like DNA-binding protein  47.83 
 
 
90 aa  72  0.000000000003  Pseudoalteromonas atlantica T6c  Bacteria  unclonable  0.0000000045924  n/a   
 
 
-
 
NC_009667  Oant_2203  histone family protein DNA-binding protein  39.18 
 
 
91 aa  71.2  0.000000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0471577  n/a   
 
 
-
 
NC_007969  Pcryo_1653  histone-like DNA-binding protein  41.49 
 
 
90 aa  71.2  0.000000000004  Psychrobacter cryohalolentis K5  Bacteria  unclonable  0.00000047794  unclonable  0.0000440637 
 
 
 
NC_010003  Pmob_1910  histone family protein DNA-binding protein  41.24 
 
 
90 aa  70.9  0.000000000005  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000000311196  n/a   
 
 
-
 
NC_011663  Sbal223_2747  histone family protein DNA-binding protein  42.71 
 
 
90 aa  70.9  0.000000000005  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000000276504  normal  0.581764 
 
 
-
 
NC_004347  SO_1797  HU family DNA-binding protein  42.71 
 
 
90 aa  70.9  0.000000000005  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007498  Pcar_1686  DNA-binding protein HU-beta, NS1(HU-1)  41.67 
 
 
90 aa  70.9  0.000000000005  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  6.460310000000001e-19  n/a   
 
 
-
 
NC_009997  Sbal195_1630  histone family protein DNA-binding protein  42.71 
 
 
90 aa  70.9  0.000000000005  Shewanella baltica OS195  Bacteria  unclonable  0.0000000159632  normal 
 
 
-
 
NC_009665  Shew185_1596  histone family protein DNA-binding protein  42.71 
 
 
90 aa  70.9  0.000000000005  Shewanella baltica OS185  Bacteria  unclonable  0.00000000000169185  n/a   
 
 
-
 
NC_007954  Sden_0658  histone-like DNA-binding protein  40.62 
 
 
90 aa  70.9  0.000000000005  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1493  histone family protein DNA-binding protein  42.71 
 
 
90 aa  70.9  0.000000000005  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000000388309  n/a   
 
 
-
 
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