More than 300 homologs were found in PanDaTox collection
for query gene DhcVS_1153 on replicon NC_013552
Organism: Dehalococcoides sp. VS



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013552  DhcVS_1153  dihydroorotate dehydrogenase  100 
 
 
417 aa  848    Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00356185  n/a   
 
 
-
 
NC_009455  DehaBAV1_1183  dihydroorotate dehydrogenase 1B  93.5 
 
 
324 aa  624  1e-178  Dehalococcoides sp. BAV1  Bacteria  unclonable  0.0000000240078  n/a   
 
 
-
 
NC_002936  DET1372  dihydroorotate dehydrogenase 1B  97.74 
 
 
310 aa  612  9.999999999999999e-175  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.0000766739  n/a   
 
 
-
 
NC_013216  Dtox_2350  dihydroorotate dehydrogenase 1B  59.46 
 
 
305 aa  359  5e-98  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.893945 
 
 
-
 
NC_009483  Gura_2150  dihydroorotate dehydrogenase 1B  55.88 
 
 
305 aa  356  5e-97  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000128716  n/a   
 
 
-
 
NC_007644  Moth_2127  dihydroorotate oxidase B, catalytic subunit  56.47 
 
 
352 aa  346  4e-94  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.95796 
 
 
-
 
NC_009253  Dred_1686  dihydroorotate dehydrogenase 1B  55.7 
 
 
304 aa  344  1e-93  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00226183  n/a   
 
 
-
 
NC_007517  Gmet_1841  dihydroorotate dehydrogenase 1B  55.23 
 
 
305 aa  343  2.9999999999999997e-93  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000167258  normal 
 
 
-
 
NC_008609  Ppro_2629  dihydroorotate dehydrogenase 1B  57.34 
 
 
304 aa  338  9.999999999999999e-92  Pelobacter propionicus DSM 2379  Bacteria  normal  0.372998  n/a   
 
 
-
 
NC_010814  Glov_2304  dihydroorotate dehydrogenase 1B  57.44 
 
 
304 aa  335  5.999999999999999e-91  Geobacter lovleyi SZ  Bacteria  normal  0.268618  n/a   
 
 
-
 
NC_011146  Gbem_2399  dihydroorotate dehydrogenase 1B  54.33 
 
 
305 aa  330  2e-89  Geobacter bemidjiensis Bem  Bacteria  normal  0.317433  n/a   
 
 
-
 
NC_012918  GM21_1820  dihydroorotate dehydrogenase 1B  53.98 
 
 
305 aa  330  2e-89  Geobacter sp. M21  Bacteria  n/a    normal  0.0131374 
 
 
-
 
NC_009943  Dole_1495  dihydroorotate dehydrogenase family protein  55.78 
 
 
303 aa  330  3e-89  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1296  putative oxidoreductase  56.29 
 
 
314 aa  329  5.0000000000000004e-89  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000000054569  n/a   
 
 
-
 
NC_002939  GSU1755  dihydroorotate dehydrogenase 1B  53.92 
 
 
305 aa  318  1e-85  Geobacter sulfurreducens PCA  Bacteria  normal  0.0665746  n/a   
 
 
-
 
NC_012793  GWCH70_1049  dihydroorotate dehydrogenase 1B  51.21 
 
 
313 aa  316  6e-85  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4014  dihydroorotate dehydrogenase family protein  51.62 
 
 
314 aa  314  9.999999999999999e-85  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1814  dihydroorotate dehydrogenase 1B  52.48 
 
 
302 aa  313  3.9999999999999997e-84  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00465279  n/a   
 
 
-
 
NC_008346  Swol_1279  hypothetical protein  55.22 
 
 
302 aa  313  3.9999999999999997e-84  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0618  dihydroorotate dehydrogenase family protein  51.82 
 
 
307 aa  312  5.999999999999999e-84  Clostridium cellulolyticum H10  Bacteria  normal  0.056994  n/a   
 
 
-
 
NC_013411  GYMC61_1919  dihydroorotate dehydrogenase 1B  51.56 
 
 
313 aa  311  2e-83  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_002950  PG1065  dihydroorotate dehydrogenase 1B  51.2 
 
 
307 aa  309  5.9999999999999995e-83  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.257669 
 
 
-
 
NC_003909  BCE_3929  dihydroorotate dehydrogenase 1B  50.87 
 
 
309 aa  309  6.999999999999999e-83  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS3735  dihydroorotate dehydrogenase 1B  50.87 
 
 
309 aa  309  6.999999999999999e-83  Bacillus anthracis str. Sterne  Bacteria  normal  0.329166  n/a   
 
 
-
 
NC_005957  BT9727_3626  dihydroorotate dehydrogenase 1B  50.87 
 
 
309 aa  309  6.999999999999999e-83  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3643  dihydroorotate dehydrogenase 1B  50.87 
 
 
309 aa  309  6.999999999999999e-83  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4023  dihydroorotate dehydrogenase 1B  50.87 
 
 
309 aa  309  6.999999999999999e-83  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3898  dihydroorotate dehydrogenase 1B  50.87 
 
 
309 aa  309  6.999999999999999e-83  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000211547 
 
 
-
 
NC_011658  BCAH187_A3933  dihydroorotate dehydrogenase 1B  50.87 
 
 
309 aa  309  6.999999999999999e-83  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2533  dihydroorotate dehydrogenase 1B  50.52 
 
 
309 aa  308  8e-83  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1300  dihydroorotate dehydrogenase family protein  57.19 
 
 
307 aa  308  1.0000000000000001e-82  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1259  dihydroorotate dehydrogenase 1B  50.52 
 
 
309 aa  308  2.0000000000000002e-82  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3711  dihydroorotate dehydrogenase 1B  50.87 
 
 
309 aa  308  2.0000000000000002e-82  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.657474  n/a   
 
 
-
 
NC_011725  BCB4264_A3982  dihydroorotate dehydrogenase 1B  50.52 
 
 
309 aa  306  3e-82  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1380  dihydroorotate dehydrogenase family protein  51.16 
 
 
300 aa  305  1.0000000000000001e-81  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_09420  dihydroorotate oxidase B, catalytic subunit  50.97 
 
 
304 aa  304  2.0000000000000002e-81  Halothermothrix orenii H 168  Bacteria  decreased coverage  0.000187971  n/a   
 
 
-
 
NC_013517  Sterm_2665  dihydroorotate dehydrogenase family protein  53.36 
 
 
322 aa  303  3.0000000000000004e-81  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2286  dihydroorotate dehydrogenase 1B  49.67 
 
 
300 aa  301  2e-80  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.00000000160117  n/a   
 
 
-
 
NC_013223  Dret_0019  dihydroorotate dehydrogenase family protein  54.83 
 
 
304 aa  299  5e-80  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0947  dihydroorotate oxidase B, catalytic subunit  51.49 
 
 
307 aa  295  7e-79  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.302447  n/a   
 
 
-
 
NC_008262  CPR_1197  dihydroorotate dehydrogenase 1B  51.21 
 
 
299 aa  293  4e-78  Clostridium perfringens SM101  Bacteria  normal  0.0733416  n/a   
 
 
-
 
NC_007512  Plut_1596  dihydroorotate dehydrogenase 1  48.29 
 
 
331 aa  293  5e-78  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.316081 
 
 
-
 
NC_008261  CPF_1382  dihydroorotate dehydrogenase 1B  50.87 
 
 
299 aa  292  9e-78  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0126255  n/a   
 
 
-
 
NC_008751  Dvul_0072  dihydroorotate dehydrogenase family protein  55.05 
 
 
307 aa  289  6e-77  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0721  dihydroorotate dehydrogenase family protein  50.86 
 
 
307 aa  288  1e-76  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_11880  dihydroorotate oxidase B, catalytic subunit  50.17 
 
 
306 aa  287  2e-76  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00147089  normal  0.0175843 
 
 
-
 
NC_007519  Dde_0056  dihydroorotate oxidase B, catalytic subunit  51.64 
 
 
308 aa  288  2e-76  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2850  dihydroorotate dehydrogenase family protein  53.74 
 
 
302 aa  286  5e-76  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_0593  dihydroorotate oxidase B, catalytic subunit  50.52 
 
 
314 aa  285  9e-76  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_1783  dihydroorotate dehydrogenase 1  50.52 
 
 
313 aa  285  1.0000000000000001e-75  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2143  dihydroorotate dehydrogenase family protein  49.5 
 
 
308 aa  284  2.0000000000000002e-75  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011126  HY04AAS1_1244  dihydroorotate dehydrogenase 1B  48.64 
 
 
310 aa  284  3.0000000000000004e-75  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1469  dihydroorotate dehydrogenase 1B  47.42 
 
 
311 aa  282  7.000000000000001e-75  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0123797  n/a   
 
 
-
 
NC_013171  Apre_0785  dihydroorotate dehydrogenase family protein  47.93 
 
 
299 aa  281  2e-74  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0657  dihydroorotate dehydrogenase family protein  47.28 
 
 
300 aa  279  7e-74  Petrotoga mobilis SJ95  Bacteria  normal  0.345915  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0163  dihydroorotate dehydrogenase 1B  46.78 
 
 
311 aa  279  8e-74  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.000375439  n/a   
 
 
-
 
NC_013173  Dbac_2846  dihydroorotate dehydrogenase family protein  49.33 
 
 
302 aa  278  1e-73  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2762  dihydroorotate oxidase B, catalytic subunit  44.48 
 
 
303 aa  277  2e-73  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_010644  Emin_0729  dihydroorotate dehydrogenase family protein  47.42 
 
 
303 aa  276  6e-73  Elusimicrobium minutum Pei191  Bacteria  normal  hitchhiker  0.0000000867503 
 
 
-
 
NC_011059  Paes_0553  dihydroorotate dehydrogenase family protein  48.11 
 
 
309 aa  276  6e-73  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0300599  normal  0.358914 
 
 
-
 
NC_013204  Elen_1663  dihydroorotate dehydrogenase family protein  49.13 
 
 
356 aa  275  1.0000000000000001e-72  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.0000377649  hitchhiker  0.00130858 
 
 
-
 
NC_011883  Ddes_2200  dihydroorotate dehydrogenase family protein  49.66 
 
 
308 aa  275  1.0000000000000001e-72  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0614  dihydroorotate dehydrogenase family protein  49.14 
 
 
314 aa  273  4.0000000000000004e-72  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.275175 
 
 
-
 
NC_008009  Acid345_0389  dihydroorotate oxidase B, catalytic subunit  46.55 
 
 
321 aa  269  8e-71  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.42122  normal  0.593329 
 
 
-
 
NC_014150  Bmur_2402  dihydroorotate dehydrogenase family protein  44.05 
 
 
303 aa  268  8.999999999999999e-71  Brachyspira murdochii DSM 12563  Bacteria  normal  0.350257  n/a   
 
 
-
 
NC_010322  PputGB1_1769  dihydroorotate dehydrogenase family protein  46.71 
 
 
311 aa  265  8e-70  Pseudomonas putida GB-1  Bacteria  normal  normal  0.960944 
 
 
-
 
NC_013889  TK90_0051  dihydroorotate dehydrogenase family protein  45.92 
 
 
330 aa  264  2e-69  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1950  dihydroorotate dehydrogenase family protein  49.3 
 
 
297 aa  261  2e-68  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.0000000449747  n/a   
 
 
-
 
NC_008576  Mmc1_3426  dihydroorotate oxidase B, catalytic subunit  46.78 
 
 
312 aa  261  2e-68  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008532  STER_0969  dihydroorotate dehydrogenase 1B  45.36 
 
 
315 aa  258  1e-67  Streptococcus thermophilus LMD-9  Bacteria  normal  0.0916684  n/a   
 
 
-
 
NC_009513  Lreu_0125  dihydroorotate dehydrogenase 1B  45.7 
 
 
308 aa  255  1.0000000000000001e-66  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.0000118304  n/a   
 
 
-
 
NC_010511  M446_3011  dihydroorotate dehydrogenase family protein  44.66 
 
 
320 aa  254  2.0000000000000002e-66  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.124702 
 
 
-
 
NC_007484  Noc_2822  dihydroorotate dehydrogenase 1  43.3 
 
 
331 aa  251  2e-65  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0209539  n/a   
 
 
-
 
NC_013170  Ccur_07830  dihydroorotate oxidase B, catalytic subunit  48.64 
 
 
305 aa  249  9e-65  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.221427  normal  0.399938 
 
 
-
 
NC_008530  LGAS_1092  dihydroorotate dehydrogenase 1B  43.64 
 
 
311 aa  248  1e-64  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.149271  normal 
 
 
-
 
NC_013595  Sros_2810  dihydroorotate dehydrogenase family protein  41.69 
 
 
324 aa  244  3e-63  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.930619 
 
 
-
 
NC_013510  Tcur_3010  dihydroorotate dehydrogenase family protein  43.73 
 
 
336 aa  243  5e-63  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0061654  n/a   
 
 
-
 
NC_013385  Adeg_0375  dihydroorotate dehydrogenase family protein  46.77 
 
 
308 aa  243  5e-63  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_3279  dihydroorotate dehydrogenase 1  44.22 
 
 
321 aa  241  2e-62  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_0772  dihydroorotate dehydrogenase family protein  46.52 
 
 
333 aa  240  2.9999999999999997e-62  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1572  dihydroorotate dehydrogenase family protein  41.64 
 
 
306 aa  233  5e-60  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0950593  n/a   
 
 
-
 
NC_008392  Bamb_5904  dihydroorotate dehydrogenase family protein  42.72 
 
 
325 aa  227  3e-58  Burkholderia ambifaria AMMD  Bacteria  normal  0.475547  hitchhiker  0.00651291 
 
 
-
 
NC_007333  Tfu_1059  dihydroorotate oxidase B, catalytic subunit  43.24 
 
 
330 aa  226  9e-58  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010557  BamMC406_5681  dihydroorotate dehydrogenase family protein  42.72 
 
 
325 aa  225  1e-57  Burkholderia ambifaria MC40-6  Bacteria  hitchhiker  0.00753595  normal  0.0457266 
 
 
-
 
NC_013203  Apar_0811  dihydroorotate dehydrogenase family protein  39.06 
 
 
308 aa  223  4e-57  Atopobium parvulum DSM 20469  Bacteria  normal  0.0183468  normal  0.536442 
 
 
-
 
NC_010816  BLD_0529  dihydroorotate dehydrogenase  43.07 
 
 
323 aa  221  9.999999999999999e-57  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1357  dihydroorotate dehydrogenase family protein  42.71 
 
 
313 aa  211  2e-53  Thermobispora bispora DSM 43833  Bacteria  normal  0.736204  normal  0.101187 
 
 
-
 
NC_013721  HMPREF0424_0923  dihydroorotate dehydrogenase 1B  42.14 
 
 
333 aa  211  3e-53  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_008578  Acel_1296  dihydroorotate oxidase B, catalytic subunit  44.03 
 
 
351 aa  208  1e-52  Acidothermus cellulolyticus 11B  Bacteria  normal  0.717011  normal  0.119624 
 
 
-
 
NC_013926  Aboo_0832  dihydroorotate dehydrogenase family protein  39.34 
 
 
299 aa  202  9e-51  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_010803  Clim_1863  dihydroorotate dehydrogenase family protein  50.5 
 
 
319 aa  196  6e-49  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_0450  dihydroorotate dehydrogenase 1B  39.73 
 
 
304 aa  191  2.9999999999999997e-47  Methanosaeta thermophila PT  Archaea  normal  0.187702  n/a   
 
 
-
 
NC_013739  Cwoe_3206  dihydroorotate dehydrogenase family protein  39.79 
 
 
303 aa  190  4e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.454845  normal  0.81979 
 
 
-
 
NC_014210  Ndas_3100  dihydroorotate dehydrogenase family protein  39.25 
 
 
316 aa  188  1e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1475  dihydroorotate oxidase B, catalytic subunit  41.96 
 
 
304 aa  187  2e-46  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0763679  n/a   
 
 
-
 
NC_010085  Nmar_1390  dihydroorotate dehydrogenase family protein  35.26 
 
 
303 aa  186  8e-46  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_007355  Mbar_A1466  dihydroorotate dehydrogenase 1B  36.45 
 
 
301 aa  184  2.0000000000000003e-45  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.831826  normal 
 
 
-
 
NC_009634  Mevan_1424  dihydroorotate dehydrogenase 1B  36.75 
 
 
304 aa  183  4.0000000000000006e-45  Methanococcus vannielii SB  Archaea  normal  0.601121  n/a   
 
 
-
 
NC_007955  Mbur_1225  dihydroorotate dehydrogenase 1B  36.18 
 
 
300 aa  181  2.9999999999999997e-44  Methanococcoides burtonii DSM 6242  Archaea  normal  0.0613844  n/a   
 
 
-
 
NC_009637  MmarC7_1436  dihydroorotate dehydrogenase 1B  38.13 
 
 
304 aa  180  4e-44  Methanococcus maripaludis C7  Archaea  normal  0.405217  normal  0.196798 
 
 
-
 
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