| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1841 |
|---|
| Symbol | |
|---|
| ID | 3741518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2054377 |
|---|
| End bp | 2055294 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637779125 |
|---|
| Product | dihydroorotate dehydrogenase 1B |
|---|
| Protein accession | YP_384795 |
|---|
| Protein GI | 78223048 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000000167258 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAC CAGACCTCTC TGTCGAGATA GCGGGAATCA AACTCAGGAA CCCGGTCATG
ACCGCTTCGG GGACTTTCGG CTACGGCGAA GAATTTGCCG CGTACGTGAA TCTCGAAAAG
ATCGGCGCCA TCATCACCAA GGGACTCTCT CTGAAGCCCA AGGCCGGCAA CCCGACGCCA
CGCATCCAGG AAACCACCGG CGGGATGCTG AACGCTATTG GTCTCCAGAA TGTGGGAATA
GATGCCTTTA TCGAGAAAAA GGTGCCGTTT CTCCGCACCG TCAACACGCC TGCCATCGTC
AACTTTTTCG GCAATACCGT CGAGGAATAC GCCGAGCTCG CCGAGCGGCT CGACAAGATT
CCCGAAGTGG CCGGGATGGA GATCAACATC TCGTGTCCGA ATGTGAAGCA CGGCGGTATC
GTTTTCGGCA CCGAGCCCAA GGCGGCATAT TCGGTGGTGA AGGCGGTACG GGAGGCCACC
ATCAAGCCGG TAATTGTGAA GCTCTCCCCC AACGTCACCG ACATCGTGGA GATGGCCTGG
GCCTGTGCTG ACGCCGAGGC TGATGCCCTG TCCCTCATCA ATACCCTGAC CGGCATGGCC
ATCGACCTCA AGTCCCGGCG GCCCATCCTT GCCAACGTGA CCGGCGGCCT TTCGGGACCG
GCGGTGAAAC CGGTGGCCCT CAGGATGGTC TGGCAGGTGG CTAAGGCGGT GAAAATTCCG
GTGATCGGCA TCGGCGGCAT CATGTCCGGG ACCGACGCCC TGGAGTTCAT GCTGGCCGGC
GCCACGGCCG TTCAGGTCGG GACCGCCAAC TTTCTTGACC CGGCCGCTTC CGAGCGGATT
GCGGCGGAAA TGGAGCAGTA TCTGGTTAAC AACGGAATTA CGGACGTGAA GGAGCTAATC
GGCGCACTGC AGGTCTGA
|
|---|
| Protein sequence | MKRPDLSVEI AGIKLRNPVM TASGTFGYGE EFAAYVNLEK IGAIITKGLS LKPKAGNPTP
RIQETTGGML NAIGLQNVGI DAFIEKKVPF LRTVNTPAIV NFFGNTVEEY AELAERLDKI
PEVAGMEINI SCPNVKHGGI VFGTEPKAAY SVVKAVREAT IKPVIVKLSP NVTDIVEMAW
ACADAEADAL SLINTLTGMA IDLKSRRPIL ANVTGGLSGP AVKPVALRMV WQVAKAVKIP
VIGIGGIMSG TDALEFMLAG ATAVQVGTAN FLDPAASERI AAEMEQYLVN NGITDVKELI
GALQV
|
|---|
| |