| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0811 |
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| Symbol | |
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| ID | 8413676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 892494 |
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| End bp | 893420 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022393 |
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| Product | dihydroorotate dehydrogenase family protein |
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| Protein accession | YP_003179831 |
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| Protein GI | 257784614 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase |
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| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0183468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.536442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTAGACC AGGTAAAAAT GGCCGTCAAT CTGGGTGGAA TCCAGATGAA AAATCCTATT
AATACTGCTG CAGGTACCTT TGGTTATGGC TGGCAGTTTG AAGGCTTTTA CGACGTCTCC
CTGCTTGGCG CCATTACTAT GAAGGGTGTT GCCCGCGTTC CTTGGGAAGG AAATCCTGCT
CCTCGTATGT GTGAGCTTAA CGGCGGCATG ATGAACAGCG TTGGCCTTGC TAATCCGGGA
GTGGATGATT TTATCGCTCA CACTGATGAC TACATGAAAG ACCTTGAAGA CCGTGGTACG
CGCGTTATCA TGCAGATGGC AGCACATTCC GTGCAAGAAA TGATTGACGT TGTCGAGCGT
CTTGAGGAGC TTAATCCGCA CATTTCAGCT ATTGAGCTTA ACGTGAGCTG TCCAAATCTC
GAGAAGGGCG GCAGACCTCT TGGCGGCACT CCTGAGCAGG CAACAGAGAT TATGAAAGCG
GTTCGTCCTC TAACGAAGCT GCCTATCTTG GTTAAGATGG CTCCCGTCAA TGTTGCTGAG
ATTGGCAAGG CTTTTGAGGC TGAGGGTGCT GATGGCCTCA CATTGATTAA CTCTATTCCA
GGCATGTCTA TCAATGTTCA TACTAGAAAG AGCAGGCTTT CTAAGCCAAC AGGCGGCCTC
AGTGGTCCTT TATGTCATAA CGCTGCTGTC CGTATGGTTT GGGAGTGCGC TCAGGCAGTC
TCTATCCCTA TCTGTGGTGT AGGTGGTGTG GAAACAGGCG AAGATGCTGC GGAATTTATT
CTGGCAGGCG CTACGGCCGT CTCGGTTGGT TCTGCAAACC TTTACGACCC TATGTGTGCT
CCACGTATTC TGAACGAGCT TACTGATTGG GCAAAGTCTC AGGGCGTATC TGACATCCAC
GAACTGATTG GAGCTGTTGA ATGTTAA
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| Protein sequence | MVDQVKMAVN LGGIQMKNPI NTAAGTFGYG WQFEGFYDVS LLGAITMKGV ARVPWEGNPA
PRMCELNGGM MNSVGLANPG VDDFIAHTDD YMKDLEDRGT RVIMQMAAHS VQEMIDVVER
LEELNPHISA IELNVSCPNL EKGGRPLGGT PEQATEIMKA VRPLTKLPIL VKMAPVNVAE
IGKAFEAEGA DGLTLINSIP GMSINVHTRK SRLSKPTGGL SGPLCHNAAV RMVWECAQAV
SIPICGVGGV ETGEDAAEFI LAGATAVSVG SANLYDPMCA PRILNELTDW AKSQGVSDIH
ELIGAVEC
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