| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1092 |
|---|
| Symbol | |
|---|
| ID | 4439695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1101001 |
|---|
| End bp | 1101936 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639672933 |
|---|
| Product | dihydroorotate dehydrogenase 1B |
|---|
| Protein accession | YP_814903 |
|---|
| Protein GI | 116629731 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.149271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 89 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAGGAAA ATATGATTAA TACGCATGTA AAATTACCGG GATTAGATTT AAAGAATCCA
GTTATGCCAG CAAGTGGAAC TTTTGGTTTT GGAGATGTGC CAGCAGCTAA GAAGTTTGAT
TTAAATGATC TTGGAGCAAT GGTTATTAAG ACTACTACTC CGCATGCAAC AACAGGTAAT
CCTCAGCCGC AAATAGCTGT TTTAGAGACC GGAGTTTTAA ATTCAGTTGG ATTAACAAAT
CCTGGAGTTG ATGCGGTAAT TGAAGATAAG TTAAAACCTT TACGTCAGAG TTATCCTGAT
TTGCCAATCA TGGCTAGCGT TGGTGGCGAA GATGAAGCAG GTTATGTTGA AGTAGCTAAA
AAATTATCTG ATTCAGGTTT AGTTAATGCT TTAGAAATTA ATGTTTCTTG TCCTAACGTA
AACCAAGGCG GAATGAGTTT TGGTGTTCAT CCAGATGTAG TTGAATCTTT AACTAAGAAA
ATTAAGGCAG TGACTAATGT TCCCATTTAT GTGAAGTTAA CTCCAAATGT GACTGATATT
ACACAAATTT CTAAAGCTGC TGAAAAAGGC GGTGCAGATG GTTTGTCCTT AATTAATACT
CTTTTAGGGA TGGATATTGA TATTAAAACA AGAAAACCTG TTTTAGGCCA CAATATTGGC
GGTCTTTCTG GAGAAGCAGT CAAGCCAGTT GCGCTTAGAA TGGTTCACCA AGTTCGTCAA
AGTACAAGTT TGCCGATTAT TGGAATGGGC GGAATTAGTT CAGCTCAAGA CGTAATCAAA
TTCATGCTTG CTGGTGCTAA TGCTGTTGCG GTTGGAACAG CTCATTTTAA AGACAGTATT
GCGTCAAAGC ATATTGCTGA TGAATTGCCT AATGAATTAG AAAAATTAGG TATTGAAGAC
ATTAATGACT TGGTCAATCA AGTTGAATTT AATTAA
|
|---|
| Protein sequence | MEENMINTHV KLPGLDLKNP VMPASGTFGF GDVPAAKKFD LNDLGAMVIK TTTPHATTGN
PQPQIAVLET GVLNSVGLTN PGVDAVIEDK LKPLRQSYPD LPIMASVGGE DEAGYVEVAK
KLSDSGLVNA LEINVSCPNV NQGGMSFGVH PDVVESLTKK IKAVTNVPIY VKLTPNVTDI
TQISKAAEKG GADGLSLINT LLGMDIDIKT RKPVLGHNIG GLSGEAVKPV ALRMVHQVRQ
STSLPIIGMG GISSAQDVIK FMLAGANAVA VGTAHFKDSI ASKHIADELP NELEKLGIED
INDLVNQVEF N
|
|---|
| |