| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0163 |
|---|
| Symbol | |
|---|
| ID | 6331361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 179045 |
|---|
| End bp | 179980 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642656441 |
|---|
| Product | dihydroorotate dehydrogenase 1B |
|---|
| Protein accession | YP_001930362 |
|---|
| Protein GI | 188996111 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.000375439 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAT TAAAACATAC ACTTTTTGGC TTAGAATTTA AAAATCCTGT ATGGACAGCT
TCAGGAACTT TTAGCTATGG TCTTGAAGTC GCAAAAATAT ATGATTTATC ATTACTTGGC
GCTATAGTTG TTAAAGGATT ATCATTAAAA CCAAGAAAAG GAAATATGCC AGAAAGAATT
GTAGAAACGC CAGCTGGAAT GTTAAACTCA ATTGGTCTTC AAAACCCGGG AGTTGATTAT
TTTATAAATG AAACACTTCC TAAATTAAAA AAATACGACA CTAAAATATT TGCTAATGTT
TTTGGAGAGG ATGAAGATGA ATATCTTGCA GTAGCAGAAA GACTTGATAA AGCAGATGGA
GTTCATGGAC TTGAGTTAAA CGTATCATGT CCGAACGTCA AAAAAGGTGG AATTGCATTT
GGAACAGACC CAGAGGTTTT ATATAATCTT GTTTATAAAA TGAAGAAAAT TACAAAAAAG
CCACTTCTTG TAAAATTAAG TCCAAATGTT AGCAATATTC TTGATACCGC TGATGCTTGT
GTATCTGCAG GAGCTGATGG TTTGGTACTT ATAAATACAC TTCTTGGTGT TGCTATAGAT
GTAGAAAGAG AAAAGCCAAT TTTGTCAACC ATTACTGGAG GACTTTCTGG TCCTGCCATG
CTTCCAATAG CTGTTAGGAT GATATGGCAA GTTTATCAAA AATACGGCAG CAGAATACCC
ATCATCGGTG TAGGTGGAAT ATCAAACTAC AAAGATGCAC TGCAGCATAT ATTGGCTGGA
GCATCTGCTA TACAAGTGGG AACAGCAAAT TTTTATGACC CTCTCTCGCC GTTAAAAATA
ATTGAAGATT TAAAAAATCA TTTAGATAAA AAAGGTTATG TGCATTATAG TCAACTAATA
GGAAAAGCTC ATCAAATGAT AATAAAGGAG GTGTAA
|
|---|
| Protein sequence | MDKLKHTLFG LEFKNPVWTA SGTFSYGLEV AKIYDLSLLG AIVVKGLSLK PRKGNMPERI
VETPAGMLNS IGLQNPGVDY FINETLPKLK KYDTKIFANV FGEDEDEYLA VAERLDKADG
VHGLELNVSC PNVKKGGIAF GTDPEVLYNL VYKMKKITKK PLLVKLSPNV SNILDTADAC
VSAGADGLVL INTLLGVAID VEREKPILST ITGGLSGPAM LPIAVRMIWQ VYQKYGSRIP
IIGVGGISNY KDALQHILAG ASAIQVGTAN FYDPLSPLKI IEDLKNHLDK KGYVHYSQLI
GKAHQMIIKE V
|
|---|
| |