| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1153 |
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| Symbol | pyrD |
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| ID | 8658082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 1064221 |
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| End bp | 1065474 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | dihydroorotate dehydrogenase |
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| Protein accession | YP_003330595 |
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| Protein GI | 270308537 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00356185 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACCTT CGGGTATGTT TCGGTACTGT GCCGGCTTGC CGAAAATTCC GAATGAAAAA
CCGGGCTATG GTTTTTTAAC TCAGTATTCG GGAAGAAGCC TGGCTGAAAT CTGCCTGTCC
TTCTCCCGTA TGCGTAACAA ACAAACTACC CAAATAGGAT TTTGTGTGTC CCCTAATAAC
AACAAAGCCA AAACAGGAGG TGTTTCGCTT TATGTTTTCA GTGTAGTCTA TAAAACCCAA
ATAAGCAAGA TAAAATATTA TTGCTTAGCT TTAAAGGAAA TGTTGTGTTC TGTTGTCTCC
AAGCCTTATA ATCTTGGGCG TATGGCTGAA CTTAATTTAA ATGTAGATAT CGCCCCGTAT
AACGCCCGCC AGCTTAGGCT TGCCAATCCT GTTATGGTGG CTTCGGGTAC GTTTGGCTAT
GGTGATGAGT ACCCCCACCT TTTTGACCGC AACCGTCTGG GTGCCATTGT CTGCAAAGCC
ACTACCCTGA AACCGAGGGA AGGAAATCCC CAGCCGCGCA TAGCAGAAAC TCCAAATGGC
ATGCTTAATT CCATCGGGCT GCAAAACATG GGTGTGGAGG CGGTTATCCG GGAAAAGGCG
CCCCAGTGGT ACACCTGGAA TGTGCCTGTA ATAGTAAATA TTGCCGCTGA GAGTATTGAA
GATTACGCTG AGCTTGCACG GCGGCTGGAT AAAGTTCCCG GTGTAAGCGG TATAGAAGTA
AATATCAGCT GCCCAAACGT CAAGTGCGGC TGTATAGAGT TCGGTTCTTC ACCCGAATCT
GCCGCCAGAG TGACTGATGC AGTCAGGAAT GCGACCACTT TGCCCCTGAT AATAAAGCTT
ACCCCAAATA CCAGCAGTAT TATCGAATTG GCAAGGGCAG TGGCAGATGC CGGGGCTGAT
GCTATTTCGC TTATAAATAC CCTGCGGGGT ATGCGTATAG ATATTAAAAA ACGGCGTCCC
ATACTGGGTA ACCATACCGG CGGGCTTTCA GGTCCGGCTA TAAAACCGGT GGCTGTCAGT
ATGGTCTATC AGGTATCCGG TGCGGTAAAT GTGCCTGTTA TCGGCGGCGG CGGTATTATG
AATGCCGAAG ATGCGCTTGA ATTTATAATG GCCGGGGCAA CCGCTATCCA GATAGGCACA
GCCAACTTGG TCAACCCGCG TGCCCCTATA GAGGTGCTTG AGAGTCTGGA AGCTTATGCC
AGAGCCGAGG GGCTAAAAAG CATACGGGAA ATAGTGGGCA TAGCCAGAAG CTAG
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| Protein sequence | MIPSGMFRYC AGLPKIPNEK PGYGFLTQYS GRSLAEICLS FSRMRNKQTT QIGFCVSPNN
NKAKTGGVSL YVFSVVYKTQ ISKIKYYCLA LKEMLCSVVS KPYNLGRMAE LNLNVDIAPY
NARQLRLANP VMVASGTFGY GDEYPHLFDR NRLGAIVCKA TTLKPREGNP QPRIAETPNG
MLNSIGLQNM GVEAVIREKA PQWYTWNVPV IVNIAAESIE DYAELARRLD KVPGVSGIEV
NISCPNVKCG CIEFGSSPES AARVTDAVRN ATTLPLIIKL TPNTSSIIEL ARAVADAGAD
AISLINTLRG MRIDIKKRRP ILGNHTGGLS GPAIKPVAVS MVYQVSGAVN VPVIGGGGIM
NAEDALEFIM AGATAIQIGT ANLVNPRAPI EVLESLEAYA RAEGLKSIRE IVGIARS
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