Gene Sfum_2850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2850 
Symbol 
ID4458815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3511538 
End bp3512446 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content66% 
IMG OID639703624 
Productdihydroorotate dehydrogenase family protein 
Protein accessionYP_846963 
Protein GI116750276 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID[TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTTCGG GCACCTTCGG CTACGGCGAG GAATACGCGG ACTTTCTCGA CCCGGGCCGC 
CTCGGGGCCG TCATCGTCAA GGGCATATCC CTGTTGCCCC GCCCCGGCAA CCCGCCTCCG
CGGCTGGTCG AGACCCCCGC CGGGATGATC AATGCCATCG GGCTCGAAAA CGTCGGCGTG
GACCGCTTCA TCGACGTCAA GCTCCCGCTG CTCCGCCAAC GGCGGGCGAC GGTCATCGTC
AACATCTTCG GCAATACCGT GGATGAATAT GCCGGGCTGG CCTCGAAACT GGACGGAGAG
GACGGCGTCG CGGCGCTCGA GATCAACATC AGTTGCCCGA ACGTGAAGCA GGGAGGCATG
GTCTTCGGCA CCGACCCGGC CACGGCCGCA GCCGTCGTCG GAGCGGTCCG CGCGCGCACC
GCGCTCCCGC TCATCACCAA GCTGACGCCC AACGTCACGC GCATCGGCGA AATCGCGCGG
GCCGCGGTCG ACGCGGGCAC CGACGCGATC TCGTGCATCA ATACCGTCGC CGCCATGGCC
GTGGACATCT TCTCGCGACG CCCGAAGCTC GCCAACGTTT TCGGCGGGCT CTCCGGCCCC
GCCGTCAAAC CCATCGCCCT GCGCTGCACC TATGAAGTGC TGCAGGCGGT GAAGTGCCCG
GTGATCGGAG TGGGCGGGAT CGGGACGGCG ACGGACGCCC TGGAATTCAT GCTGCTCGGG
GCCAGAGCGG TTCAGGTTGG GACGGCCAAT TTCGTGAACC CGGGAGTATC CGTGGAGATT
CTCGAAGGGA TCGAGCGATT CCTGCGTTTC CAGGGGCTGG ACCGCATCGA GGACTTCATC
GGCACGCTGG ACACCGAATG CCTCTTTCCG TTCGCCGAGG ATGCCTGCGG GGTCCTGGAC
CTTTCCTGA
 
Protein sequence
MASGTFGYGE EYADFLDPGR LGAVIVKGIS LLPRPGNPPP RLVETPAGMI NAIGLENVGV 
DRFIDVKLPL LRQRRATVIV NIFGNTVDEY AGLASKLDGE DGVAALEINI SCPNVKQGGM
VFGTDPATAA AVVGAVRART ALPLITKLTP NVTRIGEIAR AAVDAGTDAI SCINTVAAMA
VDIFSRRPKL ANVFGGLSGP AVKPIALRCT YEVLQAVKCP VIGVGGIGTA TDALEFMLLG
ARAVQVGTAN FVNPGVSVEI LEGIERFLRF QGLDRIEDFI GTLDTECLFP FAEDACGVLD
LS