19 homologs were found in PanDaTox collection
for query gene Ccur_08190 on replicon NC_013170
Organism: Cryptobacterium curtum DSM 15641



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013170  Ccur_08190  transcriptional regulator, tetR family  100 
 
 		 242 aa  507  1e-143  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  0.137766 
 
 
-
 
NC_013170  Ccur_12460  transcriptional regulator  61.82 
 
 		 227 aa  285  4e-76  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013165  Shel_03680  transcriptional regulator, tetR family  33.85 
 
 		 216 aa  106  3e-22  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013165  Shel_17710  hypothetical protein  27.98 
 
 		 218 aa  72.4  0.000000000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.746787  normal  1 
 
 
-
 
NC_010508  Bcenmc03_1121  TetR family transcriptional regulator  30.71 
 
 		 210 aa  55.8  0.0000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0496337  normal  1 
 
 
-
 
NC_010551  BamMC406_1993  TetR family transcriptional regulator  30.71 
 
 		 210 aa  55.5  0.0000008  Burkholderia ambifaria MC40-6  Bacteria  normal  0.209055  normal  0.134866 
 
 
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NC_010512  Bcenmc03_6292  TetR family transcriptional regulator  33.33 
 
 		 210 aa  53.1  0.000004  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013165  Shel_27610  transcriptional regulator  25.15 
 
 		 221 aa  51.6  0.00001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.424005  normal  1 
 
 
-
 
NC_007348  Reut_B4446  TetR family transcriptional regulator  34.45 
 
 		 210 aa  51.6  0.00001  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_3058  TetR family transcriptional regulator  28.06 
 
 		 209 aa  50.4  0.00003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.765793  normal  0.0466418 
 
 
-
 
NC_012912  Dd1591_1166  transcriptional regulator, TetR family  27.86 
 
 		 215 aa  48.9  0.00008  Dickeya zeae Ech1591  Bacteria  normal  0.522591  n/a   
 
 
-
 
NC_009720  Xaut_0894  TetR family transcriptional regulator  30.3 
 
 		 260 aa  47.4  0.0002  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008942  Mlab_1697  hypothetical protein  33.98 
 
 		 199 aa  47.4  0.0002  Methanocorpusculum labreanum Z  Archaea  normal  1  normal  0.280342 
 
 
-
 
NC_009632  SaurJH1_2746  regulatory protein TetR  33.33 
 
 		 186 aa  46.2  0.0005  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_2689  TetR family transcriptional regulator  33.33 
 
 		 186 aa  46.2  0.0005  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_011004  Rpal_4290  transcriptional regulator, TetR family  27 
 
 		 226 aa  45.4  0.0008  Rhodopseudomonas palustris TIE-1  Bacteria  hitchhiker  0.000567463  n/a   
 
 
-
 
NC_009637  MmarC7_0085  TetR family transcriptional regulator  35.59 
 
 		 195 aa  43.9  0.003  Methanococcus maripaludis C7  Archaea  hitchhiker  0.0016021  decreased coverage  0.0000722764 
 
 
-
 
NC_010581  Bind_2027  TetR family transcriptional regulator  28.83 
 
 		 208 aa  43.1  0.004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.835752  normal  1 
 
 
-
 
NC_007333  Tfu_0518  TetR family transcriptional regulator  27.69 
 
 		 206 aa  42  0.008  Thermobifida fusca YX  Bacteria  normal  0.290772  n/a   
 
 
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