| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3058 |
|---|
| Symbol | |
|---|
| ID | 3712742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 3499382 |
|---|
| End bp | 3500011 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_348787 |
|---|
| Protein GI | 77459280 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.765793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0466418 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA TCAGCCAGAC CCGGCGCGGC CGGCCAGCCA ACGAGGCACT CAGCCAATCG
ATCGTCGACG CGGCCGGCGA ACTTTTTGTG GAGTTGGGAT TTCAAGCGAC AACAATGGAA
AAGGTCGCCC AGCGGGCAAA AATATCTAAG CTAAGCATCT ACCGACACTT CGAGAACAAG
GAGGCGCTAT TCAGCGCGGC CATCGCGGCC CACTGCCATC AGTTTGCACC ACAGGCCATT
GCTGAAGGCG TCGACGGTTC GGCTGCAGAG CAGCTAATGG CGGTGGGGAC ATTCCTGCTG
CGCACGTTGT TGAGTCCGGA AGTGCGCAGT GTTGAAGCCA TGATCATGGT CGACAAGGCG
AAGCAAAAGT CGTTGAGCAA GCTCCATTAC GAAGCCGGCC CCGCCTATGT CACTGCCCAG
ATCGAGGCCC TGTTGCGTCA GTTGCACGCG GAGGCGATGC TAAATGTGCC AGACCCTTTG
GAGTCTGCCC GGTTGTTTGC CGCGCTTATC AAAGGGTCCG ATCTTCTGAT GATCGCCCGC
TTCGATGAGG CGAAGGCAAA GGACGACAAT GAAGTCGAAT CCTATTGCCG GTCGGCCGTC
GCAATGTTCA TCGCAGCGCA CGGTGCTTAG
|
|---|
| Protein sequence | MTEISQTRRG RPANEALSQS IVDAAGELFV ELGFQATTME KVAQRAKISK LSIYRHFENK
EALFSAAIAA HCHQFAPQAI AEGVDGSAAE QLMAVGTFLL RTLLSPEVRS VEAMIMVDKA
KQKSLSKLHY EAGPAYVTAQ IEALLRQLHA EAMLNVPDPL ESARLFAALI KGSDLLMIAR
FDEAKAKDDN EVESYCRSAV AMFIAAHGA
|
|---|
| |