Gene BamMC406_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1993 
Symbol 
ID6178817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand- 
Start bp2222562 
End bp2223194 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content60% 
IMG OID641681759 
ProductTetR family transcriptional regulator 
Protein accessionYP_001808690 
Protein GI172061038 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.209055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.134866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGAAA ACAGCCAGGG CCGGCGCGGT CGGCCCGCCA ACGAGGCGCT TCGCCAAACG 
ATCGTCGACG CGGCCTGCGA ACTCTTTGTG GAATTGGGTT TTCAAGCGAC GACCATGGAC 
AAGGTCGCGC AGCGGGCGAA GATATCCAAG CTGAGCATCT ATCGGCACTT CGAGAACAAG 
GAGGCGCTGT TCAGCGCGGC CATGGTGGCC CGCTGCGATC AATTTGCACC GCAGGCCCTT 
TCTGAAGGCG TTGACGGTTC GGCCGAAGAT CAGCTGGTGG CGGTCGGGGC CTCCCTGCTT 
CGCACGCTGT TGAGCCCGGA CGTCCGCAGT GTCGAAGCCA TGGTTTTGGC CGACAAGAAG 
AATCAAAAGT CGTTAAGCAA GCTCCATTAC GAAGCCGGGC CGGCCCATGT CATCGCCCAC 
ATCGAGGCCG TGTTGCGTCA GTTGCACGCT AAAGGGATGC TGAACGTGCC CGATGCTCTC 
CAGTCCGCCC GATTGTTTGC CGCGCTTTTC AAAGGATCCG ATCTCCTGCT TATCGCACGC 
TTCGATGAGG CGAGAGCAGA GGACGACAAC GAAATCGAAT CCTATTGCCG GTCGGCCGTC 
GCCATGTTCA TCGCCGCGCA CGGTGGCATC TGA
 
Protein sequence
MTENSQGRRG RPANEALRQT IVDAACELFV ELGFQATTMD KVAQRAKISK LSIYRHFENK 
EALFSAAMVA RCDQFAPQAL SEGVDGSAED QLVAVGASLL RTLLSPDVRS VEAMVLADKK 
NQKSLSKLHY EAGPAHVIAH IEAVLRQLHA KGMLNVPDAL QSARLFAALF KGSDLLLIAR 
FDEARAEDDN EIESYCRSAV AMFIAAHGGI