18 homologs were found in PanDaTox collection
for query gene Shel_17710 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013165  Shel_17710  hypothetical protein  100 
 
 		 218 aa  457  9.999999999999999e-129  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.746787  normal  1 
 
 
-
 
NC_013165  Shel_03680  transcriptional regulator, tetR family  27.05 
 
 		 216 aa  76.6  0.0000000000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
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NC_013170  Ccur_08190  transcriptional regulator, tetR family  27.98 
 
 		 242 aa  72.4  0.000000000005  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  0.137766 
 
 
-
 
NC_013170  Ccur_12460  transcriptional regulator  25.14 
 
 		 227 aa  57.8  0.0000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
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NC_013165  Shel_27610  transcriptional regulator  23.44 
 
 		 221 aa  45.8  0.0005  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.424005  normal  1 
 
 
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NC_007530  GBAA_3303  TetR family transcriptional regulator  34.85 
 
 		 191 aa  45.1  0.001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.916403  n/a   
 
 
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NC_009511  Swit_4623  TetR family transcriptional regulator  32.88 
 
 		 213 aa  43.9  0.002  Sphingomonas wittichii RW1  Bacteria  normal  0.317667  normal  1 
 
 
-
 
NC_005945  BAS3063  TetR family transcriptional regulator  34.38 
 
 		 192 aa  43.5  0.003  Bacillus anthracis str. Sterne  Bacteria  normal  0.857011  n/a   
 
 
-
 
NC_008321  Shewmr4_3084  TetR family transcriptional regulator  36.54 
 
 		 159 aa  43.1  0.003  Shewanella sp. MR-4  Bacteria  normal  0.012098  normal  1 
 
 
-
 
NC_008322  Shewmr7_0888  TetR family transcriptional regulator  36.54 
 
 		 159 aa  43.1  0.003  Shewanella sp. MR-7  Bacteria  hitchhiker  0.00720668  normal  1 
 
 
-
 
NC_008577  Shewana3_0851  TetR family transcriptional regulator  36.54 
 
 		 159 aa  43.1  0.003  Shewanella sp. ANA-3  Bacteria  normal  0.134933  normal  1 
 
 
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NC_004347  SO_3743  TetR family transcriptional regulator  36.54 
 
 		 159 aa  43.5  0.003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_0648  TetR family transcriptional regulator  33.33 
 
 		 157 aa  42.4  0.005  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0903763  n/a   
 
 
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NC_008700  Sama_0733  TetR family transcriptional regulator  34.62 
 
 		 162 aa  42  0.007  Shewanella amazonensis SB2B  Bacteria  normal  0.307696  normal  1 
 
 
-
 
NC_009455  DehaBAV1_1244  TetR family transcriptional regulator  24.4 
 
 		 206 aa  42  0.008  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_3198  transcriptional regulator, TetR family protein  38.46 
 
 		 158 aa  42  0.008  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.99203  n/a   
 
 
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NC_009438  Sputcn32_3067  TetR family transcriptional regulator  34.62 
 
 		 159 aa  41.6  0.009  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00227859  n/a   
 
 
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NC_013457  VEA_001349  transcriptional regulator LuxT  28.99 
 
 		 153 aa  41.6  0.009  Vibrio sp. Ex25  Bacteria  decreased coverage  0.00000000649622  n/a   
 
 
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