| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0648 |
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| Symbol | |
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| ID | 5661047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 802320 |
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| End bp | 802793 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641235193 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001500510 |
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| Protein GI | 157960476 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0903763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCAAGC GTTCTAAAAT CCAAACCGAG CAGACAGTGC AGCAGATCCT CGATGAGGCG
ATGAAGCAGA TCTTAGACAT AGGCTATGAA GCCATGTCTT ACTCGACACT CTCCCAAGCA
ACAGGCATTA GCCGTACAGG GATCAGCCAC CATTTCCCCT ATAAAGTCGA TTTTCTTAAA
CAGCTAGACA GTCGTATCGG CAACCTGTTT ATCGACCGTC TCGATTTCTC CTGCATTCAG
TCACTGCAAA ACTCTTGGAA GGCCTCCTTA AAACAGCCAT ACTTTATCGC CATCATCCGG
CTGTATTTTT CCATTTGTGG ATCCCAGCAG GTTAATGTTA ACCGCTACAA AGCCATCACC
TTAGCGAGTG AAAAGGCACT GAGTGAGCTC GGTGAGCAGG GGCGTTTATT AGTCAATGCC
TTAGTGGGGC AGAGCGCTCT ACTCCTATGT AATCAGCCAG CCGAGAGTCG TTAA
|
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| Protein sequence | MAKRSKIQTE QTVQQILDEA MKQILDIGYE AMSYSTLSQA TGISRTGISH HFPYKVDFLK
QLDSRIGNLF IDRLDFSCIQ SLQNSWKASL KQPYFIAIIR LYFSICGSQQ VNVNRYKAIT
LASEKALSEL GEQGRLLVNA LVGQSALLLC NQPAESR
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