Gene Shewana3_0851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0851 
Symbol 
ID4477062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp988815 
End bp989294 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content45% 
IMG OID639725387 
ProductTetR family transcriptional regulator 
Protein accessionYP_868495 
Protein GI117919303 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.134933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGC GCTCGCGAGT ACAGACTGAG CAGACCATAA ATCAGATTAT GGATGAAGCG 
TTAAGACAAA TTTTGACTAT TGGCTTTGAG ACTATGTCTT ATACCACGTT ATCTGAAGCA
ACGGGGATTA GCCGCACCGG TATTAGTCAT CACTTTCCGC GTAAAAACGA CTTCTTAATC
CGTTTAGATA GTCGTATTGG CAATTTATTT GTTGCCGCGC TCGACTTTTC TAGCCAAGAA
GCCTTAGAAG CCTCTTGGAT GAAAGCGATG CAAGAAGAGC ATTACCGCGC AGTGTTAAGA
TTATTCTTCA GCCTCTGTGG TGGCGCGAAT AATGAAATCA CCCTCTTCAG AGCGGTCAGC
ACAGCACGTC AGCAAGCCAT TGCTGAATTA GGATTGGTCG GTGATCGCAC CATCAATCAT
CTATTAGGCC GTACTGCGGT TATGCTGCTG TCTAATTTTG ATGTTGCCAA AGCGGCATAA
 
Protein sequence
MAKRSRVQTE QTINQIMDEA LRQILTIGFE TMSYTTLSEA TGISRTGISH HFPRKNDFLI 
RLDSRIGNLF VAALDFSSQE ALEASWMKAM QEEHYRAVLR LFFSLCGGAN NEITLFRAVS
TARQQAIAEL GLVGDRTINH LLGRTAVMLL SNFDVAKAA