Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0851 |
Symbol | |
ID | 4477062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 988815 |
End bp | 989294 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639725387 |
Product | TetR family transcriptional regulator |
Protein accession | YP_868495 |
Protein GI | 117919303 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.134933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGC GCTCGCGAGT ACAGACTGAG CAGACCATAA ATCAGATTAT GGATGAAGCG TTAAGACAAA TTTTGACTAT TGGCTTTGAG ACTATGTCTT ATACCACGTT ATCTGAAGCA ACGGGGATTA GCCGCACCGG TATTAGTCAT CACTTTCCGC GTAAAAACGA CTTCTTAATC CGTTTAGATA GTCGTATTGG CAATTTATTT GTTGCCGCGC TCGACTTTTC TAGCCAAGAA GCCTTAGAAG CCTCTTGGAT GAAAGCGATG CAAGAAGAGC ATTACCGCGC AGTGTTAAGA TTATTCTTCA GCCTCTGTGG TGGCGCGAAT AATGAAATCA CCCTCTTCAG AGCGGTCAGC ACAGCACGTC AGCAAGCCAT TGCTGAATTA GGATTGGTCG GTGATCGCAC CATCAATCAT CTATTAGGCC GTACTGCGGT TATGCTGCTG TCTAATTTTG ATGTTGCCAA AGCGGCATAA
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Protein sequence | MAKRSRVQTE QTINQIMDEA LRQILTIGFE TMSYTTLSEA TGISRTGISH HFPRKNDFLI RLDSRIGNLF VAALDFSSQE ALEASWMKAM QEEHYRAVLR LFFSLCGGAN NEITLFRAVS TARQQAIAEL GLVGDRTINH LLGRTAVMLL SNFDVAKAA
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