| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3067 |
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| Symbol | |
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| ID | 5079707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3559528 |
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| End bp | 3560007 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640500265 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001184579 |
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| Protein GI | 146294155 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00227859 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAAC GCTCGCGGGT ACAAACTGAG CAAACCATTA ATCAAATTAT GGATGAAGCG
TTAAAGCAGA TTTTGACTAT TGGCTTTGAG ACAATGTCTT ATACTACGTT ATCTGAAGCT
ACGGGTATTA GCCGTACAGG CATTAGTCAT CATTTTCCGC GCAAAAGCGA TTTTCTGGTT
CGTTTAGATA GTCGTATTGG CAATCTATTT GTTGCGGCTC TGGATTTTTC TAGCCAAGAG
GCATTGGAAA CATCATGGAT GCAGGCAATG CAGGAAGAAC ATTATCGTGC GGTATTGAGA
CTGTTTTTTA GTCTTTGTGG TGGTGCAAAT AATGAAATCA CCCTCTTTAG AGCGGTGAGT
TCAGCTCGTC AGCAAGCGAT TTCAGAGCTA GGCTTAGCGG GCGATCGTAC AATCAATCAT
TTATTGGGCC GTACTGCTAT GATGTTGTTA TCAAACTTTG ATATTGCTAA AGCGGCATAA
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| Protein sequence | MAKRSRVQTE QTINQIMDEA LKQILTIGFE TMSYTTLSEA TGISRTGISH HFPRKSDFLV
RLDSRIGNLF VAALDFSSQE ALETSWMQAM QEEHYRAVLR LFFSLCGGAN NEITLFRAVS
SARQQAISEL GLAGDRTINH LLGRTAMMLL SNFDIAKAA
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