11 homologs were found in PanDaTox collection
for query gene CNC01770 on replicon NC_006685
Organism: Cryptococcus neoformans var. neoformans JEC21



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_006685  CNC01770  u6 snRNA-associated sm-like protein lsm2, putative  100 
 
 		 108 aa  221  3e-57  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.368252  n/a   
 
 
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NC_009355  OSTLU_28777  predicted protein  63.41 
 
 		 130 aa  112  1.0000000000000001e-24  Ostreococcus lucimarinus CCE9901  Eukaryota  hitchhiker  0.000754445  n/a   
 
 
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NC_009048  PICST_50259  snRNA-associated protein, Sm class  64.56 
 
 		 94 aa  108  2.0000000000000002e-23  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.0481772 
 
 
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BN001304  ANIA_10963  small nuclear ribonucleoprotein (LSM2), putative (AFU_orthologue; AFUA_2G15210)  66.67 
 
 		 98 aa  101  4e-21  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.647481 
 
 
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NC_011671  PHATR_10494  predicted protein  52.94 
 
 		 98 aa  100  7e-21  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.774867  n/a   
 
 
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NC_006684  CNB00200  pre-mRNA splicing factor, putative  33.75 
 
 		 121 aa  43.1  0.001  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  decreased coverage  0.000299914  n/a   
 
 
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NC_009358  OSTLU_12445  predicted protein  29.07 
 
 		 114 aa  43.1  0.001  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.0527627  n/a   
 
 
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BN001307  ANIA_02105  small nuclear ribonucleoprotein SmD1, putative (AFU_orthologue; AFUA_2G05110)  30.59 
 
 		 121 aa  42.4  0.002  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.349462 
 
 
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NC_006685  CNC05120  glycine rich protein, putative  33.77 
 
 		 117 aa  42.4  0.002  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  1  n/a   
 
 
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NC_011683  PHATRDRAFT_7848  predicted protein  29.49 
 
 		 135 aa  42.7  0.002  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.957276  n/a   
 
 
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NC_009360  OSTLU_12601  predicted protein  32.81 
 
 		 115 aa  40.8  0.006  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  1  normal  0.206988 
 
 
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