Gene OSTLU_12445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_12445 
Symbol 
ID5001395 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009358 
Strand
Start bp408736 
End bp409299 
Gene Length564 bp 
Protein Length114 aa 
Translation table 
GC content64% 
IMG OID640416816 
Productpredicted protein 
Protein accessionXP_001417233 
Protein GI145345472 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.0527627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCG TGCGGTTTTT GCAGAAACTC TCCAACGAAA GCGTGACGAT AGAGCTCAAG 
AACGGCACCA CGGCGCACGG GACGATCATG GGTGCGTGCA CGATGACGAC GACGGCGCGC
GACGCGCGAG GACGACGCGC GAGGACGAAC GAGAGAAGCG CGAATGCGAA ACGCGGGAAA
CGCGGCGACG ATCGGGACGC GGCGAGAAGA CTCGACGGGA GACGAGACGC GAGAGGGACG
AGACGCAGGG CGAGCGACGC GAGCGAAGAC TGACGAGCGC GAAAATCACG GCGTCGCGCG
CGATCGACAG GCGTGGACGT GAGCATGAAC ACGCACCTGA AGCAGGTGAA GCTCACGCTC
AAGGGTAAAA ACCCGACGGC GGTCGAACAC CTGAGCGTTC GAGGGAACAC GATTCGGTAT
TACATCCTTC CGGACTCTTT GAATCTGGAC ACTTTGTTAG TAGACGACAC GCCCAAGCAA
GGGAAACCGC GCGCGAAGGC GGCGGCGAGC GCCGGTCGAG GGCGCGGTCG CGGTCGAGGG
CGCGGGCGCG CGCGGCCGAC GTAG
 
Protein sequence
MKLVRFLQKL SNESVTIELK NGTTAHGTIM GVDVSMNTHL KQVKLTLKGK NPTAVEHLSV 
RGNTIRYYIL PDSLNLDTLL VDDTPKQGKP RAKAAASAGR GRGRGRGRGR ARPT