Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_12445 |
Symbol | |
ID | 5001395 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009358 |
Strand | + |
Start bp | 408736 |
End bp | 409299 |
Gene Length | 564 bp |
Protein Length | 114 aa |
Translation table | |
GC content | 64% |
IMG OID | 640416816 |
Product | predicted protein |
Protein accession | XP_001417233 |
Protein GI | 145345472 |
COG category | [K] Transcription |
COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.0527627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTCG TGCGGTTTTT GCAGAAACTC TCCAACGAAA GCGTGACGAT AGAGCTCAAG AACGGCACCA CGGCGCACGG GACGATCATG GGTGCGTGCA CGATGACGAC GACGGCGCGC GACGCGCGAG GACGACGCGC GAGGACGAAC GAGAGAAGCG CGAATGCGAA ACGCGGGAAA CGCGGCGACG ATCGGGACGC GGCGAGAAGA CTCGACGGGA GACGAGACGC GAGAGGGACG AGACGCAGGG CGAGCGACGC GAGCGAAGAC TGACGAGCGC GAAAATCACG GCGTCGCGCG CGATCGACAG GCGTGGACGT GAGCATGAAC ACGCACCTGA AGCAGGTGAA GCTCACGCTC AAGGGTAAAA ACCCGACGGC GGTCGAACAC CTGAGCGTTC GAGGGAACAC GATTCGGTAT TACATCCTTC CGGACTCTTT GAATCTGGAC ACTTTGTTAG TAGACGACAC GCCCAAGCAA GGGAAACCGC GCGCGAAGGC GGCGGCGAGC GCCGGTCGAG GGCGCGGTCG CGGTCGAGGG CGCGGGCGCG CGCGGCCGAC GTAG
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Protein sequence | MKLVRFLQKL SNESVTIELK NGTTAHGTIM GVDVSMNTHL KQVKLTLKGK NPTAVEHLSV RGNTIRYYIL PDSLNLDTLL VDDTPKQGKP RAKAAASAGR GRGRGRGRGR ARPT
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