Gene OSTLU_28777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28777 
Symbol 
ID4999587 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009355 
Strand+ 
Start bp290766 
End bp291419 
Gene Length654 bp 
Protein Length130 aa 
Translation table 
GC content67% 
IMG OID640415008 
Productpredicted protein 
Protein accessionXP_001415444 
Protein GI145340671 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000754445 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCCGT CGCGCGTCGT CCCCCTAACA TTCGCGCGCG GTGCCATCGA AAAAATCGCG 
AAATCGCGAT CGCGCCGCGC CGACGTCAAA AGCACGCGCG TCCTCGACGT CGCGTCGCGT 
TCGAGCGCAT CGACGCGAGC GCACGATCGC GAGCGACGCT CGCGAGACGG TTCGCGGCGC 
TCGGCGCGCG CGCAGGGCTC GACGCGCGCG AAGATTCGCG TGAGGGACGG GAGACATGTG 
CGTTCGAAGC GACGCGGTGA CGCGCGCGAC GCGCGCGCGC GGCGCGGCGC GCGACGGACG 
ACGCGACGAG GGCGCGCACA GCGCGCGAAC TGGGGTGACT GACGACGGCG CGTCGCGAAC 
GCTCGCGCTC GTAGGTTGTT TTACTCGTAC TTTAAGACGC TCGTGGGGAA GCCGGTGACG 
GTGGAGCTGA AGAACGATCT CGCCATCGCG GGCACGCTCG TGTCGGTGGA TCAATACTTG 
AACATTAAGC TCGAAAACAC GCGGGTGACG GATGAGGCGC GGTATCCGCA CATGCGAAGC 
GTGAGGAATT GTTTCATTCG CGGGAGCGTC GTGCGATACG TGCAGTTGCC GGAAGCGGCG 
GTCGACGTGG ACATTCTGCA CGACGCCACG CGGCGCGAGG CGCGAGGGGC GTGA
 
Protein sequence
MSPSRVVPLT FARGAIEKIA KSRSRRADVK STRVLDVALF YSYFKTLVGK PVTVELKNDL 
AIAGTLVSVD QYLNIKLENT RVTDEARYPH MRSVRNCFIR GSVVRYVQLP EAAVDVDILH 
DATRREARGA