Gene CNC05120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC05120 
Symbol 
ID3256458 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1540693 
End bp1541286 
Gene Length594 bp 
Protein Length117 aa 
Translation table 
GC content47% 
IMG OID638255730 
Productglycine rich protein, putative 
Protein accessionXP_569813 
Protein GI58265314 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAGTG CTCGCCCAGA CATGCCAAGT AACATACTCA CAAGACAGTA GCTTCCACTC 
TCACTTCTTA CAGCCGCTCA AGGCAAGCCA ATGGTGAGTT CTTTGGTCTA ATGGACTTGC
GCACTCTACG AATGCTTTCA ATCAGCCAAA GACAACGCTC TGACACAAAT CATATCTGCA
GCTGGTGGAA CTGAAGAATG GAGTTACCTT CAACGGTCAC CTAGTGGAAT GCGACACTTT
CATGAACGTT ACTCTTCGAG AGGTTTACCA AACTTCAGCG GACGGCGAGC GATTCTGGAA
AATGAAGGAG ATGTTTATCA AGGGTAACAT TGTGAGTCTA TCTGTGTAAC TTGAATAAAG
TGGATATATC CATTTATACT AAGGGCAAAC AAATGGCCAC GGCAACGAAC AGCAGCTAAT
AACATGGTGC TATAGATCAA GTATTTCCGT ATAGCAGACA ACATTCTGGA ACAAGCGGCT
GAGGAACAAG ACAAGGCCCG AGCAGCGAAC AGAGCGCGAG GCGGAGCTAG AGGTGGGTTG
AAATGGTTGC AAGGCAAGGC GGAGGAGTCT AGGGCGCTAA CGGGTCTATT TTAG
 
Protein sequence
MLPLSLLTAA QGKPMLVELK NGVTFNGHLV ECDTFMNVTL REVYQTSADG ERFWKMKEMF 
IKGNIIKYFR IADNILEQAA EEQDKARAAN RARGGARGGL KWLQGKAEES RALTGLF