| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_02105 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001307 |
|---|
| Strand | - |
|---|
| Start bp | 2811771 |
|---|
| End bp | 2812433 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | small nuclear ribonucleoprotein SmD1, putative (AFU_orthologue; AFUA_2G05110) |
|---|
| Protein accession | CBF86187 |
|---|
| Protein GI | 259487477 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.349462 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GCACCGTTGA CGGCCGAATT CTAACTCGCT TCAGACCGGT TCTCCCCAGA AACACGTCGA
ATCTCTCCTT TTTTGCGCGA AGTCGCAATC TTTCAACACC ATGAAGCTCG TTCGGTGCGT
AAAATCCCGT CGCAGCTCCA CGTCGAAGCT CTGCTTCATT GCTGCAAGAA CACTACTAAC
ACGTCGAAAC CAGGTTCTTA ATGAAGTGCG CCAATGAGAC GGTAACCATC GAGCTGAAGA
ATGGTTTGTC TTCTTTCATT CTAATTTTAC CTCTGCCCAT ATTACCGCTA ACATTCTCAT
CCAGGCACAA TCCTCCACGG AACTATCACC TCCGTCAGCC CGCAAATGAA CACCTCCCTG
CGAACCGTCA AGATGACACC CAAGGGTCGG GACCCAATTT CGCTGGACAC GATCAACATC
CGTGGCTCCA CGATCCGCTA CTATATCCTG CCGGACAGTC TGCCGCTTGA CACTCTGCTC
ATCGACGACA CGCCCAAGCC GAAGAACAAG GCGCGTAAGG AGGCCGATCG TGGCCGGGGT
GGTGGTCGCG GTGGACCCAG AGGGCGTGGC AGGGGCCGGG GACGGGGCCG GGGTCGTGGT
TTCTAAGCTA TAGTATTGCG AGGCTATGCT ATGCTATGAT ACAGGAGCAT TTCGTATTTG
GGA
|
|---|
| Protein sequence | MKLVRFLMKC ANETVTIELK NGTILHGTIT SVSPQMNTSL RTVKMTPKGR DPISLDTINI
RGSTIRYYIL PDSLPLDTLL IDDTPKPKNK ARKEADRGRG GGRGGPRGRG RGRGRGRGRG
F
|
|---|
| |