| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_50259 |
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| Symbol | LSM2 |
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| ID | 4840955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | - |
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| Start bp | 546497 |
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| End bp | 546781 |
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| Gene Length | 285 bp |
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| Protein Length | 94 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640392270 |
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| Product | snRNA-associated protein, Sm class |
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| Protein accession | XP_001386698 |
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| Protein GI | 126140352 |
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| COG category | [K] Transcription |
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| COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0481772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTTTCT TCAGTTTCTT CAAGACTCTT GTAGACCAAG AAGTCACTGT CGAGTTAAAG
AACGACATCG AAATCAAGGG AACCTTGAAG TCTGTAGACC AATACTTGAA CTTGAAGTTG
GACAACATCT CGTGTGTGAA TGGAACCAAC TATCCCCATT TGCATTCAGT GAAAAACTTG
TTTATCAGAG GTTCCACTGT TCGTTATGTC CACATGAGTC CAAACTCAGT TGATTGCACA
TTGTTGCAGG ATGCTTCCAG AAGAGGTATG TATAAAGAGA TATGA
|
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| Protein sequence | MLFFSFFKTL VDQEVTVELK NDIEIKGTLK SVDQYLNLKL DNISCVNGTN YPHLHSVKNL
FIRGSTVRYV HMSPNSVDCT LLQDASRRGM YKEI
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