12 homologs were found in PanDaTox collection
for query gene CHU_0220 on replicon NC_008255
Organism: Cytophaga hutchinsonii ATCC 33406



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008255  CHU_0220  hypothetical protein  100 
 
 
948 aa  1885    Cytophaga hutchinsonii ATCC 33406  Bacteria  decreased coverage  0.00000317657  normal  0.15907 
 
 
-
 
NC_008255  CHU_0804  hypothetical protein  35.41 
 
 
946 aa  424  1e-117  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.771937  normal  0.0719166 
 
 
-
 
NC_008255  CHU_1906  CHU large protein, SAP or adhesin AidA-related  35.97 
 
 
3682 aa  220  8.999999999999998e-56  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0155813 
 
 
-
 
NC_008255  CHU_1557  hypothetical protein  36.31 
 
 
3851 aa  218  2.9999999999999998e-55  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1688  hypothetical protein  29.57 
 
 
1313 aa  91.7  6e-17  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1634  hypothetical protein  29.22 
 
 
1245 aa  85.9  0.000000000000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.070583  decreased coverage  0.00112421 
 
 
-
 
NC_008255  CHU_0839  hypothetical protein  39.19 
 
 
1331 aa  70.5  0.0000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3586  conserved repeat domain protein  34.72 
 
 
3324 aa  62.4  0.00000004  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.197095 
 
 
-
 
NC_009441  Fjoh_3971  hypothetical protein  26.55 
 
 
3602 aa  57.8  0.000001  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4113  hypothetical protein  27.22 
 
 
3562 aa  52.4  0.00004  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.0537133 
 
 
-
 
NC_013132  Cpin_3714  PKD domain containing protein  30.74 
 
 
1771 aa  52  0.00006  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.333758  normal  0.0659323 
 
 
-
 
NC_002976  SERP0207  sdrG protein  38.3 
 
 
892 aa  45.1  0.007  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
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