Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0839 |
Symbol | |
ID | 4185743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 955213 |
End bp | 959208 |
Gene Length | 3996 bp |
Protein Length | 1331 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638070843 |
Product | hypothetical protein |
Protein accession | YP_677464 |
Protein GI | 110637257 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTCCGG TAAATGTCTT AACAGAAAAG ACTCAAAAAA TAAATATCCG GGGAACTGTT TTATATAAGA TGCTCGGATG TTTTGTACTT GTGACATTAT TTTCAACTGT CTCTCAGGCT CAAACGTATC TTAGTCCATC AGGGAATTTA AATATTACAA CAAATACAAC ATATTCCGGT GCAGGTATTT ATACCGGCAC AACAACAGTT AAAGCTGGGG TAACAGTTAT TTTCACCGGC GGAGTATCAT TAAGTAATTC AGCAAAGTTT GTTATAGAAG CCGGGGCTAC AGTAATTATT AATTCAGGAG GATTTAGTAC AAGCAGTTCA ACAGAAGCAA CAACAGCCAC AGGATCTAAA CTTATAATTA TAGCAGGCGG TTTGAATCTG AGTAATTCAT CTAAATTTAC CAGTAATGGT GCATTGGCCG TACGCGATGG AGGCTTGAGT ATCAGTTCTT CAGCAACACT TGGTTTGTAT GGATTAAATC AGGATACGAT CAGAGGGGCC GTTTCATTGA ATAACTCAAC AACAACAACC ATTGATACAG GGGTTGAATT ATATATAGAT GGAGATATTA CGAGTACATC ATCTGCCGGC ATGGCAGTGA ATGGAAATGT TGCTGTTGAT GGAAATTATC AATCCTGGAA TTCTGCTAAG ATTACAGGTA CAGGAGATAT AACAACAACA GGATCTATGA ATGCTGGAGG CAGCAGCACA ATTTTCGGAG TCAATCCGTA TAGCTGCAGC GGACCTGATT GTAATGGACG TAATTCATGC GGACGAACCA TTACCGCATC TACACCGTCA ACCGGAGTAT GTTTAAATTC ATCCGTAATA CTAACAGGAG TATTGAGCGG GTCGGGGACA AAAGCATATC AGTGGCAAGT AAGTACCACT TTAGGCGGTA CATATTCTAA TATCACAGGC GCAACATCAA GTACTTATAC CTTTACAGCA ACTGCTGCCA GATATTATAA GGTTAGAATA ACAGTTTCAG GTTGTGCATC GACAAGTAAT ATAATACCGA TAACCATAAA TACGCCGGCT GTGGCACCTG CTGCAATTAC AGGCAATACT TCTATTTGTG CAGGAGAATC TACAACATTA ACTGTGAGCG GCGGTAACTT GGGTACAGAT GGATCGGCAG TATGGTATGA TGCAGCTTCT TGCGGAAGTT TTATACAAAA CTGGACAAGC CAGCCTTATG CAACAATAAG AACAACTGTA AATGGTGCGA ACGGAATTTT GAATGTAACA TCAGCATTTG ATTCCTGGAT TGAAATGTAT GGGTTGGGAA CATTTAATCC GAATATTTAC AAATACATTA ATATCCGTTA CCGCGTGAAT TCAGGAGATG CACAAGCTGT ACAGATGTAT TTTACAAATG CTACTTACAC AACAGCAAAC GAAAATGCAG TAGTAGTTAG TCCTTTAATC AGTGACGGGA ACTGGCAGGT ACTTACAATT GATATGTCTA CGCATCCGCT CTGGACTTCA TCAACCGTAA CAGGCTGGAG ATATGATTTT GCATCCGGAG TTGCCAATAT GGATATTGAT TATATTTCAC TGACAGCAAA GCCTGCCGGT GGAAACAACG GTACACTTTC CTCTACCTTT AGTCCTTTGG TTACAACAAT ATACCAGGTT CGATATGAAA GTGTATGTAA TTTTACTACT TGCCAGGCGG TAACAATAAC GGTAAATAGT CCTGCAACAG CAGTAGCCGG AAGCGACATC TCAATGTGTG CGGGATCAAC AGCTGTGCCT ATTATAGCAG GGTCAAGCGC AGCAAATACG AGTGGAATTA CATGGACTTC AAACGGAACG GCAGGCACAA TCAGCGCGCC TACTTCTTTA ACAAACGCAA AATATACGCC AAGTCCTGCG GATATTGCAG CAGGCAGCAG AACGGTAACG TTAACCGCAA CAGGCCAGGG AGCTTGTCCG AATGTTACGT CAACAAAAAC AATAACGATT ATATCGTCTC CGGCTGCAAT CGGTACGCTT ACAGGTACAG CTACAGTATG TAAAGAGCAA ACAATTACGT ATAGTATTCC TTCCGTTGCA AATGCTGCAA GTTACAACTG GACAGTTCCA ACAGGTGCTG CCATTACCGC AGGTACCGGT ACAACATCTA TTACAGTTTC CTATGCAGGA GCATCGGTGA CTTCAGGGTC AGTTTCTGTA GATGCTATAA ATACCTGTGC AACTACATCA AAAAGTTTAG CCATAACAAT CAATAATACC TGTGCAAACA GCTGGATCGG AGTTACAAGT ACAGATTGGA ATACAACATC AAACTGGAGT CTTGGTATGA TTCCATCAAG TGCACATGAT GTGATGGTTC CGGCTTCAAC ACCGTTTTCT CCAACGGTTT CCGCTACAGC TAACGTAGCG TCCTTTACAA ATAACAATAC ACTGACTGTA GCTTTCGGAG CAATATTGAA TGTATATGGC AATATTACAA ACAACAGCAA TGTAAGTCCT GCAAGCGGTT CAACGGTAGC GTTTAAAGGG AACAGTGCAC AGACAGTAAG CGGTGTTCCG GTATTGTACA ATGTACAGGT AGCAAATACG TCAGGCGGTG TAGCCTTATC TTCAGCTGTT ACAGTCAGAG GCACATTGAC ATTGACAAGC GGTGTGCTTA CAACAAATTC AAACCTTACG GTCAATTTTG ATACTGGCGG TAATATTGCG TACAATTCAA CAGACGCAGG AAGTATCAGT GGCAGTGTAA CCGGCCGCAG AGATGCGATA GCACGTACAC ATTATATCGG TGCACCTTTC AATGGCGTAA CTTCAGCGCA GGTTGGGGCA ACCACACCAT TGTATTATAA CAATTACTGG AAAATGTATG CAAAGAATTT TGCCAACCAA GGCTGGTTAG CAGTAACAGA CGCCACTACG GCAATGTCTC CTGGTACAGG ATATTCTCTT GCATTACCAA ATGCAGCTTC GTTGATTTTT ACGGGTACCT ATAGCCATAG CTATACATTA CCGGGAGCAA CGTACTCGAA TGCGGCAGCA GGAAAATATA TCCTGATAGG AAATCCGTAT CCATCTACAC TGGATTGGAA TAAAGCATCC GGCTGGACAA AAACAAATGT TGCGAACGCT GTTTATTACT GGGATGCTGC AGGGAACAAA GTATCTTCTT ATGTGGCAGG TGTAAGCACT AATGGAGGTA CACAATATAT ACCCGCTATG CAGGCGTTCA TGGTAACAAC AACCGGTACA GGCGGAAGCA ATTCAAGTGT TGCGATTAAT AATAACGCAC GTTTGAGTAC GCAGAATCCA TCCTTCTTAC GTACAGGTGC CGATGAAACG ATCCGTATTA AATTAACAGG TGCAAATGCA GAGCAGTGGG ATGATGCTGT AATTCGCTTC AATGAAATGG CAACTACAGC ATTCGATACC GATTGGGATG CTTACAAAAT TCTGAGCCGT GGCCCAAGCC CGTTGGTATA TACAACACTT GGAGAGGATA TTTATTCCAT TAACTCAGTA GCAGAAGCTG CTTCACTTCC AGCAGTAGAT GTCCTGGTAT ATATTCCTGC AGATGGTAAT TATACCTTAA CGATAACAAA CAGTGATCCA ACCACTGATT ACATATTGAT AGATAAAAAA TTGGGTACAG AAAATCTTTT ATCCGGATCA GATTATAAGT TTAGCGGTGC AGGTACAGAT GCTGCAGATC GTTTCCAACT TCAGTTGCGT ACAGCAGTAA CTACAGGGAC GCAGCTATCA CAGAAGGGTA GAGGGCTTCA GATTGGTTCA GCAACAAAAG GGTTTGTCAT CCAGACAGAT CAGTTTGCCG GTAATGCAGC AGGTATTGAA ATTATGGATA TGAATGGAAA ATCGATAAGC GTATTTACAA GCAACCTTAG TGCTGCTGCC ACATACGTGC CGGTAGAACT TGCAGATGGT GCGTATCTGG TTAAGGTAAC TGTTGAGGGC AATACGTTTG CTGGTCTGAT CAGCCTGATA AAATAA
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Protein sequence | MIPVNVLTEK TQKINIRGTV LYKMLGCFVL VTLFSTVSQA QTYLSPSGNL NITTNTTYSG AGIYTGTTTV KAGVTVIFTG GVSLSNSAKF VIEAGATVII NSGGFSTSSS TEATTATGSK LIIIAGGLNL SNSSKFTSNG ALAVRDGGLS ISSSATLGLY GLNQDTIRGA VSLNNSTTTT IDTGVELYID GDITSTSSAG MAVNGNVAVD GNYQSWNSAK ITGTGDITTT GSMNAGGSST IFGVNPYSCS GPDCNGRNSC GRTITASTPS TGVCLNSSVI LTGVLSGSGT KAYQWQVSTT LGGTYSNITG ATSSTYTFTA TAARYYKVRI TVSGCASTSN IIPITINTPA VAPAAITGNT SICAGESTTL TVSGGNLGTD GSAVWYDAAS CGSFIQNWTS QPYATIRTTV NGANGILNVT SAFDSWIEMY GLGTFNPNIY KYINIRYRVN SGDAQAVQMY FTNATYTTAN ENAVVVSPLI SDGNWQVLTI DMSTHPLWTS STVTGWRYDF ASGVANMDID YISLTAKPAG GNNGTLSSTF SPLVTTIYQV RYESVCNFTT CQAVTITVNS PATAVAGSDI SMCAGSTAVP IIAGSSAANT SGITWTSNGT AGTISAPTSL TNAKYTPSPA DIAAGSRTVT LTATGQGACP NVTSTKTITI ISSPAAIGTL TGTATVCKEQ TITYSIPSVA NAASYNWTVP TGAAITAGTG TTSITVSYAG ASVTSGSVSV DAINTCATTS KSLAITINNT CANSWIGVTS TDWNTTSNWS LGMIPSSAHD VMVPASTPFS PTVSATANVA SFTNNNTLTV AFGAILNVYG NITNNSNVSP ASGSTVAFKG NSAQTVSGVP VLYNVQVANT SGGVALSSAV TVRGTLTLTS GVLTTNSNLT VNFDTGGNIA YNSTDAGSIS GSVTGRRDAI ARTHYIGAPF NGVTSAQVGA TTPLYYNNYW KMYAKNFANQ GWLAVTDATT AMSPGTGYSL ALPNAASLIF TGTYSHSYTL PGATYSNAAA GKYILIGNPY PSTLDWNKAS GWTKTNVANA VYYWDAAGNK VSSYVAGVST NGGTQYIPAM QAFMVTTTGT GGSNSSVAIN NNARLSTQNP SFLRTGADET IRIKLTGANA EQWDDAVIRF NEMATTAFDT DWDAYKILSR GPSPLVYTTL GEDIYSINSV AEAASLPAVD VLVYIPADGN YTLTITNSDP TTDYILIDKK LGTENLLSGS DYKFSGAGTD AADRFQLQLR TAVTTGTQLS QKGRGLQIGS ATKGFVIQTD QFAGNAAGIE IMDMNGKSIS VFTSNLSAAA TYVPVELADG AYLVKVTVEG NTFAGLISLI K
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