Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0804 |
Symbol | |
ID | 4183978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 908881 |
End bp | 911721 |
Gene Length | 2841 bp |
Protein Length | 946 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638070810 |
Product | hypothetical protein |
Protein accession | YP_677431 |
Protein GI | 110637224 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.771937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0719166 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGT TTTTACTTTG GATGCTCAGT CTTACTTTAT TTTCATCCTT GCAAACTAAC GCCCAATGTA CCATTGATGC TGGAGCGAAT ACTACAGTTT GTGACTCGTG GTCATCATTC TTAATACAAG GAAATGGAAC AGGGTATGAT ACTTATCAAT GGACAACCAG CGGTACAGGT ACATTTTCCG ACCTGTCAAA TAATGGCCTT ACGGCCTACT ATATACCTTC TACAGCAGAT ATTACTGCAG GCTCGGTAGA TTTAAGTGTA ACAGGTACCG GTAATTGCGC TTCTAAAACA GCTGTTTCGA TTATAACCTT TCACACTGCT CCTCTATTAA ATGTAGATGC AGGAGCAGAC CAGACAGGCT GCGGCGCGCT TACATTAACT GCTACTGCAA CCAATGCAGA GTCGTTCCAT TGGGTTGCTC TGGGATCTGG TGCATTAGCT AATGAAAATG ATCTTACGAC TAAATATACT CCGACTAATG CGGATCAATT AAATGGATCT GTTCGGCTAT GGGCAATAAT ACGTGCAAAT GATCCTATTT GTGGTTATGC AAGCGACACA GATGAAGTTG TTATAAACTA TATTCCGCCC AATGAAGTAT ATGGAGGACC TAACTTAGTA TCCTGTCAAA CTGCGTCTGT AAGTATAACC GGGTCTTCCT TGACAAATGC AACAGGTGTT ATCTGGTCTA CATCCGGAAC AGGTACCTTT TCAAGCACAA CGGATCTACA TCCGACCTAC CAGCCTTCTA CTGCAGATAT TTTAGCAGGC AATGTACATT TAATGGTACA AACTACTGGC AATGGTTCAT GTCCCGAAGG AAGAGATACA TTGCAAGTGG ACATTTTCAG CATCGCTGCA TCTGTGAACG CTGGTGCAGA TCAGACTGTA TGCAAAGATG TTGTAACCCT TACACCAGCA TACACAGGTA CAAGCGGCGT CACTTGGTCT ACATCAGGTA CCGGTACATT TAGTGCTCCA TCAACAACAA ACGCAACTTC TGTATATTAC ACATTATCCA ATGAAGATGT AGCAAATTTT ACAGGTGTGG TAACACTTAC AGCAACTACA ATCAGTAATG GACTCTGCCC AACTGCGACA GATCATTTAA CAATACGTAC TACCTCAAAC GCCGGCTTAA ATGTTGGATC CGATACAGTA GTATGTCCTG GCGCGATTAT TTATCCGGTT GCACATCTTC AGGCAGGTAC GCTAATATGG ACTACTTCAG GTACCGGAAC ATTTTCAGAT CCTACGTCTC TAACACCTGT TTACACACCA TCAGCGGCAG ATCAATTGCT GGAAGGTTAC TGGCTAACTG CAACTACACC AAGAACAAAT TGGTGCCTGT CACAATCTGG TACTAAAAGA GTTTTTCTGA AAGATATTGC AGCAACAGCA AACGCAGGTT CAGATCAAAC AATATGCGGA AGTATGGCTG CATGCTATGG CACTGTTACA AATGCAACAG GTGGTATCTG GACATCCAGC GGTACCGGAA CATTTAATCC CGGTTCTAAC TATCTCAGCA CTTCCTATAT ATTCTCTGAT GCTGATATCG CCAATAGTTT TGTTACACTT ACCCTCACAA CTACCGGAAT GTGCAATGCC TCAGCCACAG ACGCAATGAC AGTAACAACG CTTGGCGCTT CTGCGCCCGT TTTACATGCC GGTCCGGATC AGCTTATCAC TGGCACATCT GTTACATTAA ACGGAACAAG TTTTGCAACG CCTGGCGTGC AATGGTTTTC TTCAGGTACA GGTACATTCA GCAACGCCAA CGCATTATCA ACAATCTATA CACCATCAAC CCTTGATCTA CAAAACGGAA TTGTATATTT AACGCTTTCC GGATTAAATA CAATTTGCTA TGTTTCAGAT GTACTATCTG TAAAATTCGG CACAACGTAT ACACTTACAG GAACAATAAA AGCTGGAGTA AATACACTAG ACAATGGATT GGTTGCCTTA TACAAAAAAG AAGGCTCAGA ATTATATCTT GCTGAAGCAG ATTCAATCAA ACCTTCAGAT GCTGGTACAT ATGCATTCGA TAATGTAGTT ACGGGTAAAT ATATCTTACT AGCTACTCCA ACAGACAACT CAATCTACCA AAGCAATTTC TTACCTACTT ATTTAGGTGA TACTCAAGAT TGGCAAAATG CACAGGTAAT AACCGTTTCT GATAATAGCT CTTATCCAAT TTCATTAACT CCTTACGTAA GCACAAATTC ATTCTGGAAT ACAGGGCTGG ATACCATCAC TGGTATTGTC TATGTAGACC ATACATCACT TGCTGCTGCA CGTATACAAA CTACTTCCGG TACACCGGCG GTACATGCAA TCGTTTACCT TGCAGATGCA AACGGGAATA AAATTTCATA TACCCAAACA GATACAAGCG GAAGATACAA ATTTGTAAAT GTCATAGCCG GTGCATATTC AGTTATTCCG GAGTATGGCG GAACAAGTTT AGCAGGAACA ACAACTTCCA TTCCGGTTAC CATAGATGGA AACCCTGCAA CGATAGAAGA TGCCTCTGTA ACAGTTCAAA AAATATCAAC CAGTACAGGA GTGTTTAGTG CAACAAAATC TGCAATACTT CGTGCGTATC CTAACCCAGC AAAAAATATC GTTAGTGTTG ATCTGGTAAC TTCTGCAGGA ACAGGTCTAG TTAAATTAAC GAATGAAAAT GGTACTGTGA TGTTTCAGCA AGCAATGAAT CTAAGCGGAT CATCTATTAC ATTGAACATT GAAGCATTAC CAGCAGGAAT GTACATTCTT CAGCTTATTG CCGAAGACGA AGTATATACT TCAAAAGTGG TTAAATACTA A
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Protein sequence | MKKFLLWMLS LTLFSSLQTN AQCTIDAGAN TTVCDSWSSF LIQGNGTGYD TYQWTTSGTG TFSDLSNNGL TAYYIPSTAD ITAGSVDLSV TGTGNCASKT AVSIITFHTA PLLNVDAGAD QTGCGALTLT ATATNAESFH WVALGSGALA NENDLTTKYT PTNADQLNGS VRLWAIIRAN DPICGYASDT DEVVINYIPP NEVYGGPNLV SCQTASVSIT GSSLTNATGV IWSTSGTGTF SSTTDLHPTY QPSTADILAG NVHLMVQTTG NGSCPEGRDT LQVDIFSIAA SVNAGADQTV CKDVVTLTPA YTGTSGVTWS TSGTGTFSAP STTNATSVYY TLSNEDVANF TGVVTLTATT ISNGLCPTAT DHLTIRTTSN AGLNVGSDTV VCPGAIIYPV AHLQAGTLIW TTSGTGTFSD PTSLTPVYTP SAADQLLEGY WLTATTPRTN WCLSQSGTKR VFLKDIAATA NAGSDQTICG SMAACYGTVT NATGGIWTSS GTGTFNPGSN YLSTSYIFSD ADIANSFVTL TLTTTGMCNA SATDAMTVTT LGASAPVLHA GPDQLITGTS VTLNGTSFAT PGVQWFSSGT GTFSNANALS TIYTPSTLDL QNGIVYLTLS GLNTICYVSD VLSVKFGTTY TLTGTIKAGV NTLDNGLVAL YKKEGSELYL AEADSIKPSD AGTYAFDNVV TGKYILLATP TDNSIYQSNF LPTYLGDTQD WQNAQVITVS DNSSYPISLT PYVSTNSFWN TGLDTITGIV YVDHTSLAAA RIQTTSGTPA VHAIVYLADA NGNKISYTQT DTSGRYKFVN VIAGAYSVIP EYGGTSLAGT TTSIPVTIDG NPATIEDASV TVQKISTSTG VFSATKSAIL RAYPNPAKNI VSVDLVTSAG TGLVKLTNEN GTVMFQQAMN LSGSSITLNI EALPAGMYIL QLIAEDEVYT SKVVKY
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