More than 300 homologs were found in PanDaTox collection
for query gene Bind_0523 on replicon NC_010581
Organism: Beijerinckia indica subsp. indica ATCC 9039



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010581  Bind_0523  acyl-CoA dehydrogenase type 2  100 
 
 
407 aa  822    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2538  acyl-CoA dehydrogenase type 2  56.69 
 
 
378 aa  425  1e-118  Pseudomonas putida GB-1  Bacteria  normal  0.844573  decreased coverage  0.00557828 
 
 
-
 
NC_012791  Vapar_3873  Acyl-CoA dehydrogenase type 2 domain protein  58.1 
 
 
411 aa  419  1e-116  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3226  acyl-CoA dehydrogenase-related protein  58.4 
 
 
380 aa  417  9.999999999999999e-116  Pseudomonas putida KT2440  Bacteria  normal  0.690171  normal 
 
 
-
 
NC_007005  Psyr_3604  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  53.23 
 
 
393 aa  414  1e-114  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.339437 
 
 
-
 
NC_010338  Caul_2659  acyl-CoA dehydrogenase type 2  54.78 
 
 
390 aa  410  1e-113  Caulobacter sp. K31  Bacteria  normal  normal  0.387509 
 
 
-
 
NC_010552  BamMC406_4154  acyl-CoA dehydrogenase domain-containing protein  53.54 
 
 
440 aa  405  1.0000000000000001e-112  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.233252 
 
 
-
 
NC_007973  Rmet_2217  Acyl-CoA dehydrogenase  55.84 
 
 
402 aa  407  1.0000000000000001e-112  Cupriavidus metallidurans CH34  Bacteria  normal  0.0777616  normal  0.101595 
 
 
-
 
NC_008391  Bamb_3681  acyl-CoA dehydrogenase domain-containing protein  54.29 
 
 
442 aa  406  1.0000000000000001e-112  Burkholderia ambifaria AMMD  Bacteria  normal  0.902105  normal 
 
 
-
 
NC_010678  Rpic_4462  Acyl-CoA dehydrogenase type 2 domain  56.3 
 
 
402 aa  402  1e-111  Ralstonia pickettii 12J  Bacteria  normal  normal  0.542965 
 
 
-
 
NC_004578  PSPTO_1790  acyl-CoA dehydrogenase family protein  53.57 
 
 
397 aa  402  1e-111  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4596  Acyl-CoA dehydrogenase type 2 domain protein  56.3 
 
 
402 aa  402  1e-111  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2670  Acyl-CoA dehydrogenase type 2 domain protein  55.01 
 
 
389 aa  402  1e-111  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_1981  putative acyl-CoA dehydrogenase  54.23 
 
 
388 aa  395  1e-109  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3260  acyl-CoA dehydrogenase domain-containing protein  53.2 
 
 
459 aa  389  1e-107  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4333  acyl-CoA dehydrogenase type 2  53 
 
 
440 aa  387  1e-106  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.619225  normal  0.220534 
 
 
-
 
NC_008688  Pden_5014  acyl-CoA dehydrogenase type 2  54.4 
 
 
384 aa  384  1e-105  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_31100  Acyl-CoA dehydrogenase family protein  52.11 
 
 
396 aa  380  1e-104  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_4109  Acyl-CoA dehydrogenase, type 2-like  53.26 
 
 
452 aa  378  1e-104  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.381793  n/a   
 
 
-
 
NC_008543  Bcen2424_4257  acyl-CoA dehydrogenase type 2  53.26 
 
 
452 aa  378  1e-104  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.00125865  normal  0.295507 
 
 
-
 
NC_007511  Bcep18194_B1754  Acyl-CoA dehydrogenase  53.16 
 
 
454 aa  378  1e-103  Burkholderia sp. 383  Bacteria  normal  normal  0.0688656 
 
 
-
 
NC_013510  Tcur_1390  Acyl-CoA dehydrogenase type 2 domain protein  54.37 
 
 
384 aa  377  1e-103  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00428618  n/a   
 
 
-
 
NC_007348  Reut_B5046  Acyl-CoA dehydrogenase, C-terminal  53.94 
 
 
402 aa  373  1e-102  Ralstonia eutropha JMP134  Bacteria  normal  0.721222  n/a   
 
 
-
 
NC_012560  Avin_21570  Acyl-CoA dehydrogenase family protein  52.65 
 
 
400 aa  370  1e-101  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3307  putative acyl-CoA dehydrogenase  49.88 
 
 
394 aa  360  2e-98  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4897  acyl-CoA dehydrogenase domain protein  52.79 
 
 
381 aa  360  2e-98  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1170  acyl-CoA dehydrogenase domain-containing protein  52.53 
 
 
381 aa  358  8e-98  Methylobacterium extorquens PA1  Bacteria  normal  0.665446  normal  0.0188326 
 
 
-
 
NC_011757  Mchl_1330  acyl-CoA dehydrogenase domain protein  52.39 
 
 
381 aa  356  5e-97  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.135454  normal  0.523473 
 
 
-
 
NC_008463  PA14_30500  putative acyl-CoA dehydrogenase  52.73 
 
 
383 aa  351  1e-95  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2770  ccyl-CoA dehydrogenase type 2 domain protein  46.02 
 
 
406 aa  320  3.9999999999999996e-86  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.271017  normal 
 
 
-
 
NC_010505  Mrad2831_4840  acyl-CoA dehydrogenase type 2  54.31 
 
 
381 aa  319  5e-86  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.910203 
 
 
-
 
NC_009485  BBta_5139  putative acyl-CoA dehydrogenase  42.82 
 
 
399 aa  305  7e-82  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0630041 
 
 
-
 
NC_009621  Smed_5653  acyl-CoA dehydrogenase type 2  43.65 
 
 
410 aa  297  2e-79  Sinorhizobium medicae WSM419  Bacteria  normal  0.329683  normal  0.865966 
 
 
-
 
NC_010581  Bind_1847  acyl-CoA dehydrogenase type 2  41.15 
 
 
382 aa  295  9e-79  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.25699  normal 
 
 
-
 
NC_009921  Franean1_2020  acyl-CoA dehydrogenase type 2  41.31 
 
 
394 aa  290  4e-77  Frankia sp. EAN1pec  Bacteria  normal  0.692035  normal  0.294025 
 
 
-
 
NC_009485  BBta_2584  putative acyl-CoA dehydrogenase  40.73 
 
 
398 aa  273  3e-72  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0375347 
 
 
-
 
NC_007777  Francci3_2419  Acyl-CoA dehydrogenase  42.81 
 
 
332 aa  239  4e-62  Frankia sp. CcI3  Bacteria  normal  0.238624  normal  0.291589 
 
 
-
 
NC_009921  Franean1_3756  acyl-CoA dehydrogenase type 2  39.49 
 
 
418 aa  239  6.999999999999999e-62  Frankia sp. EAN1pec  Bacteria  normal  0.326681  normal 
 
 
-
 
NC_011988  Avi_5178  acyl-CoA dehydrogenase-related protein  40.16 
 
 
393 aa  238  1e-61  Agrobacterium vitis S4  Bacteria  normal  0.897204  n/a   
 
 
-
 
NC_011981  Avi_7179  acyl-CoA dehydrogenase  37.63 
 
 
394 aa  237  3e-61  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0478  acyl-CoA dehydrogenase domain-containing protein  38.48 
 
 
396 aa  232  9e-60  Roseiflexus sp. RS-1  Bacteria  normal  0.859047  normal 
 
 
-
 
NC_013093  Amir_4313  acyl-CoA dehydrogenase type 2 domain protein  39.15 
 
 
397 aa  229  6e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1183  Acyl-CoA dehydrogenase type 2 domain protein  34.18 
 
 
390 aa  218  2e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_0150  acyl-CoA dehydrogenase domain-containing protein  35.84 
 
 
394 aa  214  1.9999999999999998e-54  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0955  Acyl-CoA dehydrogenase type 2 domain protein  34.57 
 
 
398 aa  197  3e-49  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1626  Acyl-CoA dehydrogenase type 2 domain protein  34.93 
 
 
387 aa  174  2.9999999999999996e-42  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2066  acyl-CoA dehydrogenase type 2  29.55 
 
 
384 aa  164  3e-39  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.335702  n/a   
 
 
-
 
NC_009487  SaurJH9_2310  acyl-CoA dehydrogenase type 2  30.35 
 
 
384 aa  164  4.0000000000000004e-39  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.154104  n/a   
 
 
-
 
NC_009632  SaurJH1_2352  acyl-CoA dehydrogenase type 2  30.35 
 
 
384 aa  164  4.0000000000000004e-39  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.657423  n/a   
 
 
-
 
NC_002976  SERP1866  acyl-CoA dehydrogenase-related protein  30.79 
 
 
381 aa  162  9e-39  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3109  putative acyl-CoA dehydrogenase, short-chain specific  29.13 
 
 
382 aa  161  2e-38  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011772  BCG9842_B2142  putative acyl-CoA dehydrogenase, short-chain specific  29.13 
 
 
382 aa  161  2e-38  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_2881  acyl-CoA dehydrogenase type 2  28.83 
 
 
382 aa  160  3e-38  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.255861  n/a   
 
 
-
 
NC_011658  BCAH187_A3128  putative acyl-CoA dehydrogenase, short-chain specific  28.87 
 
 
382 aa  159  6e-38  Bacillus cereus AH187  Bacteria  hitchhiker  0.000407188  n/a   
 
 
-
 
NC_005957  BT9727_2857  acyl-CoA dehydrogenase, short-chain specific  28.87 
 
 
382 aa  159  7e-38  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.25076  n/a   
 
 
-
 
NC_006274  BCZK2818  acyl-CoA dehydrogenase, short-chain specific  28.87 
 
 
382 aa  159  7e-38  Bacillus cereus E33L  Bacteria  normal  0.149479  n/a   
 
 
-
 
NC_011725  BCB4264_A3094  putative acyl-CoA dehydrogenase, short-chain specific  28.87 
 
 
382 aa  159  7e-38  Bacillus cereus B4264  Bacteria  normal  0.952201  n/a   
 
 
-
 
NC_005945  BAS2889  acyl-CoA dehydrogenase, short-chain specific  28.61 
 
 
382 aa  157  4e-37  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00742766  n/a   
 
 
-
 
NC_007530  GBAA_3105  acyl-CoA dehydrogenase, short-chain specific  28.61 
 
 
382 aa  157  4e-37  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.362062  n/a   
 
 
-
 
NC_013411  GYMC61_2547  Acyl-CoA dehydrogenase type 2 domain protein  32.37 
 
 
392 aa  155  2e-36  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_3126  acyl-CoA dehydrogenase, short-chain specific, putative  29.09 
 
 
382 aa  150  5e-35  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00757934  n/a   
 
 
-
 
NC_009972  Haur_2304  acyl-CoA dehydrogenase type 2  32.72 
 
 
392 aa  144  4e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0799931  n/a   
 
 
-
 
NC_008025  Dgeo_1231  Acyl-CoA dehydrogenase, type 2-like protein  35.54 
 
 
384 aa  142  9.999999999999999e-33  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.279686  normal 
 
 
-
 
NC_008254  Meso_2091  Acyl-CoA dehydrogenase, type 2-like  28.17 
 
 
389 aa  112  2.0000000000000002e-23  Chelativorans sp. BNC1  Bacteria  normal  0.424709  n/a   
 
 
-
 
NC_007517  Gmet_3306  Acyl-CoA dehydrogenase-like  26.74 
 
 
380 aa  105  2e-21  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3775  acyl-CoA dehydrogenase domain protein  28.18 
 
 
386 aa  103  6e-21  Haliangium ochraceum DSM 14365  Bacteria  normal  0.212433  normal  0.155443 
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  27.93 
 
 
377 aa  100  4e-20  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  24.43 
 
 
381 aa  100  4e-20  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4695  acyl-CoA dehydrogenase type 2  29.07 
 
 
387 aa  100  6e-20  Salinispora arenicola CNS-205  Bacteria  normal  0.46169  normal  0.258533 
 
 
-
 
NC_011884  Cyan7425_1173  Acyl-CoA dehydrogenase type 2 domain protein  26.8 
 
 
383 aa  99  1e-19  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4265  acyl-CoA dehydrogenase type 2  29.52 
 
 
387 aa  98.2  2e-19  Salinispora tropica CNB-440  Bacteria  normal  normal  0.184931 
 
 
-
 
NC_013441  Gbro_1359  acyl-CoA dehydrogenase domain protein  26.19 
 
 
381 aa  95.9  1e-18  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0903405  n/a   
 
 
-
 
NC_009616  Tmel_0656  acyl-CoA dehydrogenase domain-containing protein  24.47 
 
 
380 aa  94.4  4e-18  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  26.18 
 
 
388 aa  94.4  4e-18  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_013202  Hmuk_2082  acyl-CoA dehydrogenase domain protein  26.61 
 
 
376 aa  94  4e-18  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  24.86 
 
 
379 aa  93.6  5e-18  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  24.93 
 
 
380 aa  93.6  6e-18  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0732  acyl-CoA dehydrogenase domain protein  27.25 
 
 
379 aa  93.2  7e-18  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0264  acyl-CoA dehydrogenase domain-containing protein  25.73 
 
 
394 aa  93.2  8e-18  Meiothermus ruber DSM 1279  Bacteria  normal  0.0644181  normal  0.99067 
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  27.25 
 
 
379 aa  92.4  1e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  25.2 
 
 
380 aa  92  1e-17  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014158  Tpau_1370  Acyl-CoA dehydrogenase type 2 domain protein  29.57 
 
 
395 aa  92.4  1e-17  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4179  acyl-CoA dehydrogenase domain protein  27.2 
 
 
381 aa  92  2e-17  Burkholderia phytofirmans PsJN  Bacteria  normal  0.011291  hitchhiker  0.000381045 
 
 
-
 
NC_007953  Bxe_C0109  putative acyl-CoA dehydrogenase  27.81 
 
 
410 aa  91.7  2e-17  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009440  Msed_0276  acyl-CoA dehydrogenase domain-containing protein  24.41 
 
 
398 aa  91.7  2e-17  Metallosphaera sedula DSM 5348  Archaea  normal  normal  0.0872822 
 
 
-
 
NC_011146  Gbem_2826  acyl-CoA dehydrogenase domain protein  26.56 
 
 
385 aa  91.7  2e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  26.08 
 
 
379 aa  91.3  3e-17  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_014212  Mesil_0067  acyl-CoA dehydrogenase domain protein  25.06 
 
 
394 aa  90.9  3e-17  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0146  Acyl-CoA dehydrogenase type 2 domain-containing protein  28.72 
 
 
382 aa  90.9  4e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.658373 
 
 
-
 
NC_007778  RPB_3894  Acyl-CoA dehydrogenase-like  27.45 
 
 
386 aa  90.9  4e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0812  acyl-CoA dehydrogenase-like protein  27.74 
 
 
393 aa  90.5  5e-17  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1707  butyryl-CoA dehydrogenase  25.67 
 
 
388 aa  90.1  6e-17  Rubrobacter xylanophilus DSM 9941  Bacteria  decreased coverage  0.00000836039  n/a   
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  25.81 
 
 
379 aa  90.1  7e-17  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_013739  Cwoe_2677  Acyl-CoA dehydrogenase type 2 domain protein  26.84 
 
 
433 aa  89.7  7e-17  Conexibacter woesei DSM 14684  Bacteria  normal  0.3001  normal  0.883174 
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  24.32 
 
 
379 aa  89.7  8e-17  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_010525  Tneu_0539  acyl-CoA dehydrogenase domain-containing protein  24.15 
 
 
405 aa  89.7  8e-17  Thermoproteus neutrophilus V24Sta  Archaea  normal  hitchhiker  0.00283131 
 
 
-
 
NC_010338  Caul_1874  acyl-CoA dehydrogenase domain-containing protein  24.53 
 
 
387 aa  89.7  8e-17  Caulobacter sp. K31  Bacteria  normal  0.33835  normal 
 
 
-
 
NC_011146  Gbem_3575  acyl-CoA dehydrogenase domain protein  25.22 
 
 
380 aa  89.7  8e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1399  acyl-CoA dehydrogenase domain-containing protein  24.32 
 
 
385 aa  89  1e-16  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1542  hypothetical protein  27.49 
 
 
413 aa  89  1e-16  Ralstonia eutropha JMP134  Bacteria  normal  0.0941275  n/a   
 
 
-
 
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