Gene Hmuk_2082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2082 
Symbol 
ID8411620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1993326 
End bp1994456 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content69% 
IMG OID645020423 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003177902 
Protein GI257388129 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTTT CGTCCGAGCA GCGTGCTATC CGTGACACCG TCCGCGAAGT CGCGGCCGAG 
GAGATCCGGC CGGTCGCACG CGAGTGTGAC CGCGAGCAGA CGTTCCCCGA GGACGCCTGG
GACACGCTGG CCGAAATCGA CGTGACCGGC CTGACGGTTC CCGAAGCATA CGGCGGCCTC
GACGTCGATC GCCAGACGTA CGCGGTCGTG AACGAGGCCG TCGCCCACGG CTCGTTGGCG
GTGGCGACCG CGCTGTCGGT CCACTGTCTC GCGACCTCCT GTCTCGCGAC CTTCGGAGAC
GAGCAGCTCC GGGAGGCGTG GCTCCCGGAC ATGGTTGCGG GCCGTCCGGT CGGGGCCTTC
GCCCTCTCCG AGCCCGAGGC GGGGTCGAAC CCTCGTCAGA TGCAGACCGT CGCGCGCCGC
GAGGGCGACG AGTACGTGAT CGACGGCGAG AAGGCCTGGA TCACGAACGG GCAGCGCTCT
GGAGTCGTGA TCGTCTTCGC GAAGACCGAC CCGGACGATC CGAACTCGGT CACCCAGTTT
CTCGTCCCCA AAGACAGCGA CGGACTGACC GTCGGTTCGA AAGAGGAGAA GCTGGGGCTG
CGAGCCAGCG ACACGACGAC GCTGACCCTC GATGATGTCC GCATTCCAGA CCGGTACCGG
CTCACCGAGG AGGGTCGCGG GCTCGCTGCG GCCCTGTCGA TCCTGACCGG CGGACGGGTC
GGGATCGCCG CACAGGCGGT CGGTCTCTCG CAGGCGGCCC TCGACGAGGC GGTCGACTAC
GTCACGGAAC GCGAACAGTT CGACGGCCCG ATCGGCGACA TCCAGAGCGT CCGGCACACG
ATCGCGGAGA TGGAGACGAC CGTCCGGGCC GGCCGCGAGC TGACCCACGC GGCGGCGCGG
GCCATGGACC GCGGCGACGA CGCTCGTGCG AGCGCGAGCG TCGCGAAGTA CTTCGCGACC
GAGGGAGCCG TCGACGTGAC CCAGCAGGCC GTCCAGCTCC ACGGCGGCTA CGGCTACACG
TCCGAGTTCG ACGTCGAGCG GTTCTACCGG GACGCCAAGG TGACGACGAT CTACGAGGGG
ACGAGCCAGA TCCAGAAGAA CGTCATCGCC CGGTCGCTCC TGGGGGAGTG A
 
Protein sequence
MHLSSEQRAI RDTVREVAAE EIRPVARECD REQTFPEDAW DTLAEIDVTG LTVPEAYGGL 
DVDRQTYAVV NEAVAHGSLA VATALSVHCL ATSCLATFGD EQLREAWLPD MVAGRPVGAF
ALSEPEAGSN PRQMQTVARR EGDEYVIDGE KAWITNGQRS GVVIVFAKTD PDDPNSVTQF
LVPKDSDGLT VGSKEEKLGL RASDTTTLTL DDVRIPDRYR LTEEGRGLAA ALSILTGGRV
GIAAQAVGLS QAALDEAVDY VTEREQFDGP IGDIQSVRHT IAEMETTVRA GRELTHAAAR
AMDRGDDARA SASVAKYFAT EGAVDVTQQA VQLHGGYGYT SEFDVERFYR DAKVTTIYEG
TSQIQKNVIA RSLLGE