Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0539 |
Symbol | |
ID | 6165728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 490568 |
End bp | 491785 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641667692 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001793928 |
Protein GI | 171185009 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00283131 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTGTTTC CCTTCGAAAG CCTCGTAGAT TTTTCCGTGG TGTTGACTCA GGAACACGAG CTGTTTAGGA GGGCTGTGAG GGAGTTCGTG GAGAGGGAGA TCGCACCGAG GGCTCTGGAG ATCGACGAGA GAGACGAGGC GCCGCTCGAC CTCCTTAGGA AGATGGGGGA GCAGGGCTTC TTCGGTCTAG AGATCCCGGA GCAGTACGGC GGCCAAGGCG GCGACTACAG GATGGCGGCG ATACTATCTG AGGAGGTGTC CCGCGCCTCG CCGGGCTTAA GCGTGTACTT CAACTCGGCG AGGCTCTTCT CCGCCCCTAT TCTCCTCTAC GGGACAGAGG AGCAGAGGCG GAGGTATCTC CCCCAGATAG CCAGGGGGGA GAAGCTGGCG GCTTTCGCCT CCACGGAGCC CTGCTGCGGC TCGGACGTAG CCGGCGTAAG GACTAGAGCG CGGCGGGTGG GGGGCAGGTG GGTGATCAAC GGCAGGAAGG CCTTCATAAG TAGCTCGGAC GTGGCCCACT ACATCCTCGT CCTCGCGAGG ACCTCCGACC CGCCGGACGC CGGCAGAAGA CACGTGGGCC TCTCCATGTT TGTGGTGGAG AGGGACGCGC CCGGCGTGAA GGTGGAGCAG TGCTACAGCA AGCTGGGCCT CCGCGGGAAC CACGCCTGCG AGATCTCGCT CACCGATGTG GAGGTGCCTG AGGAGAGCTT GGTGGGGAGG GAGGGGATGG GCTTCTACTA CGCCATGGAG GCCTTTAACA GATCCAGAAT CGGCATCGCG GCCCAGGCGG TGGGGATGGC CCAGGCCGCC TTCGAGAAAG CCTTCGACTA CGCCCACAGG AGGGAGGCCT TCGGCGTAAA GATAGCGAGC TTCCAGGCGA TCCAGTTCAG CCTAGTGGAG ATGTTGGCCA AGATCATGAC GGCCCGGCTC TTGACATACA TGGCCGCCAA GCTCGCGGAC GAGGGCAGGC GGGAGTTCGT CTTCGTGGCG TCGCTCGCCA AATACTACGC CACCGAAGCA GCCGAAGAGG TGATCTCCGA CGCCGTTGAC GTCTTCGGAG GAGCCGGCGT CGTAAGAGAG ACGGGGCTGG AGCGGCTGTA TAGAGATGTG AAGATCACCC AGATATACGA GGGGGCCAAC AACGTCCAGA AGCTGGCGGC TTACCGGCAG CTGGTTAGAC TTCTGCAGGA GAGGGGGACG CCGCCCGGCG GCGCCTAG
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Protein sequence | MVFPFESLVD FSVVLTQEHE LFRRAVREFV EREIAPRALE IDERDEAPLD LLRKMGEQGF FGLEIPEQYG GQGGDYRMAA ILSEEVSRAS PGLSVYFNSA RLFSAPILLY GTEEQRRRYL PQIARGEKLA AFASTEPCCG SDVAGVRTRA RRVGGRWVIN GRKAFISSSD VAHYILVLAR TSDPPDAGRR HVGLSMFVVE RDAPGVKVEQ CYSKLGLRGN HACEISLTDV EVPEESLVGR EGMGFYYAME AFNRSRIGIA AQAVGMAQAA FEKAFDYAHR REAFGVKIAS FQAIQFSLVE MLAKIMTARL LTYMAAKLAD EGRREFVFVA SLAKYYATEA AEEVISDAVD VFGGAGVVRE TGLERLYRDV KITQIYEGAN NVQKLAAYRQ LVRLLQERGT PPGGA
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