263 homologs were found in PanDaTox collection
for query gene Apar_1048 on replicon NC_013203
Organism: Atopobium parvulum DSM 20469



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013203  Apar_1048  glucose-1-phosphate adenylyltransferase, GlgD subunit  100 
 
 
367 aa  756    Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3197  glucose-1-phosphate adenylyltransferase, GlgD subunit  36.86 
 
 
372 aa  248  1e-64  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_3400  glucose-1-phosphate adenylyltransferase, GlgD subunit  36.56 
 
 
372 aa  228  1e-58  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000110141  n/a   
 
 
-
 
NC_011899  Hore_06910  glucose-1-phosphate adenylyltransferase, GlgD subunit  35.15 
 
 
367 aa  226  5.0000000000000005e-58  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0908  glucose-1-phosphate adenylyltransferase, GlgD subunit  37.1 
 
 
373 aa  225  8e-58  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0820  glucose-1-phosphate adenylyltransferase, GlgD subunit  35.46 
 
 
372 aa  221  1.9999999999999999e-56  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.239013 
 
 
-
 
NC_009718  Fnod_1506  glucose-1-phosphate adenylyltransferase, GlgD subunit  37.33 
 
 
371 aa  220  3e-56  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1456  glucose-1-phosphate adenylyltransferase, GlgD subunit  34.04 
 
 
371 aa  216  4e-55  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0556  glucose-1-phosphate adenylyltransferase, GlgD subunit  33.33 
 
 
380 aa  215  8e-55  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_3167  glucose-1-phosphate adenylyltransferase, GlgD subunit  34.63 
 
 
373 aa  211  2e-53  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0709  glucose-1-phosphate adenylyltransferase, GlgD subunit  34.51 
 
 
370 aa  210  3e-53  Thermotoga sp. RQ2  Bacteria  normal  0.633346  n/a   
 
 
-
 
NC_009486  Tpet_0685  glucose-1-phosphate adenylyltransferase, GlgD subunit  34.51 
 
 
379 aa  210  4e-53  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0242  glucose-1-phosphate adenylyltransferase, GlgD subunit  33.79 
 
 
371 aa  205  8e-52  Thermosipho melanesiensis BI429  Bacteria  normal  0.793058  n/a   
 
 
-
 
NC_013411  GYMC61_0560  glucose-1-phosphate adenylyltransferase, GlgD subunit  32.96 
 
 
344 aa  202  6e-51  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_5026  glycogen biosynthesis protein GlgD  31.88 
 
 
344 aa  196  7e-49  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5007  glycogen biosynthesis protein GlgD  31.88 
 
 
344 aa  196  7e-49  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4619  glycogen biosynthesis protein  30.79 
 
 
344 aa  194  2e-48  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3502  glucose-1-phosphate adenylyltransferase, GlgD subunit  31.59 
 
 
340 aa  193  4e-48  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4997  glycogen biosynthesis protein GlgD  30.89 
 
 
344 aa  193  4e-48  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4597  glucose-1-phosphate adenylyltransferase (ADP-glucose pyrophosphorylase)  31.49 
 
 
344 aa  192  1e-47  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4708  glucose-1-phosphate adenylyltransferase, GlgD subunit  30.79 
 
 
340 aa  190  2.9999999999999997e-47  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0240  glycogen biosynthesis protein GlgD  31.06 
 
 
344 aa  190  2.9999999999999997e-47  Bacillus cereus G9842  Bacteria  normal  0.167791  normal 
 
 
-
 
NC_011773  BCAH820_4978  glycogen biosynthesis protein GlgD  31.22 
 
 
344 aa  191  2.9999999999999997e-47  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS4759  glycogen biosynthesis protein GlgD  31.22 
 
 
344 aa  189  9e-47  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5121  glycogen biosynthesis protein GlgD  31.22 
 
 
344 aa  189  9e-47  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4716  nucleotidyl transferase  32.76 
 
 
407 aa  187  2e-46  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.950002  n/a   
 
 
-
 
NC_011831  Cagg_3798  Nucleotidyl transferase  32.66 
 
 
413 aa  178  2e-43  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.136621 
 
 
-
 
NC_009972  Haur_4717  glucose-1-phosphate adenylyltransferase  30.66 
 
 
415 aa  176  6e-43  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.127421  n/a   
 
 
-
 
NC_011831  Cagg_3797  glucose-1-phosphate adenylyltransferase  29.14 
 
 
417 aa  174  1.9999999999999998e-42  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.0418315 
 
 
-
 
NC_008262  CPR_0087  glucose-1-phosphate adenylyltransferase, GlgD subunit  29.89 
 
 
368 aa  173  2.9999999999999996e-42  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0946  glucose-1-phosphate adenylyltransferase  29.92 
 
 
416 aa  174  2.9999999999999996e-42  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.807387  normal  0.432603 
 
 
-
 
NC_013165  Shel_17050  glucose-1-phosphate adenylyltransferase, GlgD subunit  29.63 
 
 
375 aa  171  2e-41  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3698  nucleotidyl transferase  30.51 
 
 
415 aa  170  4e-41  Roseiflexus sp. RS-1  Bacteria  normal  0.526056  normal  0.0360642 
 
 
-
 
NC_010003  Pmob_0909  glucose-1-phosphate adenylyltransferase  28.53 
 
 
418 aa  164  3e-39  Petrotoga mobilis SJ95  Bacteria  normal  0.751771  n/a   
 
 
-
 
NC_009523  RoseRS_3699  glucose-1-phosphate adenylyltransferase  30.51 
 
 
417 aa  161  1e-38  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00250611  normal  0.0813218 
 
 
-
 
NC_009718  Fnod_1505  glucose-1-phosphate adenylyltransferase  29.05 
 
 
415 aa  160  3e-38  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0559  glucose-1-phosphate adenylyltransferase  30.58 
 
 
360 aa  157  4e-37  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013757  Gobs_5004  Nucleotidyl transferase  30.18 
 
 
395 aa  155  1e-36  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.178624  n/a   
 
 
-
 
NC_009767  Rcas_0947  nucleotidyl transferase  31.07 
 
 
415 aa  155  1e-36  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.45534 
 
 
-
 
NC_009486  Tpet_0684  glucose-1-phosphate adenylyltransferase  30.29 
 
 
423 aa  154  2e-36  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0708  glucose-1-phosphate adenylyltransferase  30.26 
 
 
423 aa  153  4e-36  Thermotoga sp. RQ2  Bacteria  normal  0.810772  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4709  glucose-1-phosphate adenylyltransferase  30.12 
 
 
376 aa  150  3e-35  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0241  glucose-1-phosphate adenylyltransferase  28.5 
 
 
412 aa  150  3e-35  Thermosipho melanesiensis BI429  Bacteria  normal  0.558186  n/a   
 
 
-
 
NC_005945  BAS4760  glucose-1-phosphate adenylyltransferase  29.82 
 
 
376 aa  149  9e-35  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4598  glucose-1-phosphate adenylyltransferase  29.82 
 
 
376 aa  149  9e-35  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4620  glucose-1-phosphate adenylyltransferase  29.82 
 
 
376 aa  149  9e-35  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5122  glucose-1-phosphate adenylyltransferase  29.82 
 
 
376 aa  149  9e-35  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4979  glucose-1-phosphate adenylyltransferase  29.73 
 
 
367 aa  148  1.0000000000000001e-34  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011772  BCG9842_B0239  glucose-1-phosphate adenylyltransferase  29.73 
 
 
367 aa  148  1.0000000000000001e-34  Bacillus cereus G9842  Bacteria  normal  0.440264  normal 
 
 
-
 
NC_011725  BCB4264_A4998  glucose-1-phosphate adenylyltransferase  29.73 
 
 
367 aa  148  1.0000000000000001e-34  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5027  glucose-1-phosphate adenylyltransferase  29.82 
 
 
376 aa  148  2.0000000000000003e-34  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5008  glucose-1-phosphate adenylyltransferase  29.73 
 
 
367 aa  147  2.0000000000000003e-34  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0869  glycogen biosynthesis protein  27.47 
 
 
374 aa  146  5e-34  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.0224402  n/a   
 
 
-
 
NC_010718  Nther_0560  glucose-1-phosphate adenylyltransferase, GlgD subunit  27.17 
 
 
353 aa  143  6e-33  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_0561  glucose-1-phosphate adenylyltransferase  28.39 
 
 
389 aa  142  9.999999999999999e-33  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_1049  glucose-1-phosphate adenylyltransferase  30.49 
 
 
382 aa  141  9.999999999999999e-33  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0557  glucose-1-phosphate adenylyltransferase  26.51 
 
 
393 aa  140  3e-32  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.920393  n/a   
 
 
-
 
NC_013235  Namu_2327  Nucleotidyl transferase  30.93 
 
 
399 aa  139  1e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0862632  hitchhiker  0.000158734 
 
 
-
 
NC_008262  CPR_0086  glucose-1-phosphate adenylyltransferase  26.18 
 
 
388 aa  137  2e-31  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3503  glucose-1-phosphate adenylyltransferase  28.01 
 
 
376 aa  136  7.000000000000001e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0868  glucose-1-phosphate adenylyltransferase  27.3 
 
 
377 aa  135  1.9999999999999998e-30  Anaerococcus prevotii DSM 20548  Bacteria  hitchhiker  0.00134562  n/a   
 
 
-
 
NC_008527  LACR_0724  glucose-1-phosphate adenylyltransferase  27.25 
 
 
380 aa  131  2.0000000000000002e-29  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1455  glucose-1-phosphate adenylyltransferase  27.61 
 
 
399 aa  131  2.0000000000000002e-29  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2700  Nucleotidyl transferase  28.3 
 
 
413 aa  130  4.0000000000000003e-29  Gordonia bronchialis DSM 43247  Bacteria  normal  0.198182  n/a   
 
 
-
 
NC_013216  Dtox_0819  glucose-1-phosphate adenylyltransferase  26.07 
 
 
402 aa  129  8.000000000000001e-29  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.24156 
 
 
-
 
NC_013517  Sterm_2144  Nucleotidyl transferase  25 
 
 
418 aa  128  2.0000000000000002e-28  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0642356  n/a   
 
 
-
 
NC_004116  SAG0854  glucose-1-phosphate adenylyltransferase  28.53 
 
 
379 aa  127  3e-28  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0620001  n/a   
 
 
-
 
NC_013515  Smon_0782  Nucleotidyl transferase  25.14 
 
 
417 aa  127  3e-28  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_3401  glucose-1-phosphate adenylyltransferase  27.19 
 
 
426 aa  127  4.0000000000000003e-28  Clostridium cellulolyticum H10  Bacteria  normal  0.0552961  n/a   
 
 
-
 
NC_013165  Shel_17060  glucose-1-phosphate adenylyltransferase  25.14 
 
 
399 aa  126  8.000000000000001e-28  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_3166  glucose-1-phosphate adenylyltransferase  26.02 
 
 
426 aa  124  2e-27  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_06920  glucose-1-phosphate adenylyltransferase  23.91 
 
 
390 aa  124  4e-27  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3198  glucose-1-phosphate adenylyltransferase  26.32 
 
 
398 aa  123  5e-27  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_1120  glucose-1-phosphate adenylyltransferase  29.06 
 
 
406 aa  123  7e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.366661  n/a   
 
 
-
 
NC_013889  TK90_1529  glucose-1-phosphate adenylyltransferase  26.48 
 
 
421 aa  119  6e-26  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.000116874 
 
 
-
 
NC_013169  Ksed_14760  ADP-glucose pyrophosphorylase  25.84 
 
 
428 aa  117  3e-25  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.173711 
 
 
-
 
NC_013441  Gbro_3305  glucose-1-phosphate adenylyltransferase  27.5 
 
 
404 aa  117  3.9999999999999997e-25  Gordonia bronchialis DSM 43247  Bacteria  normal  0.4162  n/a   
 
 
-
 
NC_008541  Arth_2140  glucose-1-phosphate adenylyltransferase  26.03 
 
 
465 aa  114  2.0000000000000002e-24  Arthrobacter sp. FB24  Bacteria  normal  0.782934  n/a   
 
 
-
 
NC_008789  Hhal_1864  glucose-1-phosphate adenylyltransferase  26.25 
 
 
423 aa  114  3e-24  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1498  glucose-1-phosphate adenylyltransferase  27.59 
 
 
420 aa  113  6e-24  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007404  Tbd_2061  glucose-1-phosphate adenylyltransferase  25.4 
 
 
439 aa  113  6e-24  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.518394 
 
 
-
 
NC_013422  Hneap_0776  glucose-1-phosphate adenylyltransferase  24.67 
 
 
423 aa  112  1.0000000000000001e-23  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0959  glucose-1-phosphate adenylyltransferase  26.39 
 
 
422 aa  111  2.0000000000000002e-23  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.256851 
 
 
-
 
NC_009338  Mflv_2193  glucose-1-phosphate adenylyltransferase  26.46 
 
 
404 aa  111  2.0000000000000002e-23  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.992249 
 
 
-
 
NC_013093  Amir_0794  glucose-1-phosphate adenylyltransferase  24.87 
 
 
406 aa  110  3e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2755  glucose-1-phosphate adenylyltransferase  28.19 
 
 
420 aa  110  3e-23  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2833  glucose-1-phosphate adenylyltransferase  28.19 
 
 
420 aa  110  3e-23  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4503  glucose-1-phosphate adenylyltransferase  25.93 
 
 
404 aa  109  9.000000000000001e-23  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1242  glucose-1-phosphate adenylyltransferase  25.65 
 
 
417 aa  109  9.000000000000001e-23  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1474  glucose-1-phosphate adenylyltransferase  26.32 
 
 
424 aa  109  1e-22  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2932  glucose-1-phosphate adenylyltransferase  27.35 
 
 
420 aa  108  1e-22  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00275218  n/a   
 
 
-
 
NC_008577  Shewana3_2931  glucose-1-phosphate adenylyltransferase  27.93 
 
 
420 aa  108  1e-22  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_1887  glucose-1-phosphate adenylyltransferase  25.32 
 
 
470 aa  108  2e-22  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00088107 
 
 
-
 
NC_008340  Mlg_0655  glucose-1-phosphate adenylyltransferase  26.46 
 
 
423 aa  107  3e-22  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.188651  normal  0.102422 
 
 
-
 
NC_009438  Sputcn32_1251  glucose-1-phosphate adenylyltransferase  26.79 
 
 
420 aa  107  4e-22  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000209  glucose-1-phosphate adenylyltransferase  26.22 
 
 
405 aa  107  5e-22  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2073  glucose-1-phosphate adenylyltransferase  27.08 
 
 
421 aa  106  7e-22  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.755782  n/a   
 
 
-
 
NC_010644  Emin_0063  glucose-1-phosphate adenylyltransferase  25.68 
 
 
403 aa  105  9e-22  Elusimicrobium minutum Pei191  Bacteria  normal  hitchhiker  0.000122298 
 
 
-
 
NC_014148  Plim_1691  glucose-1-phosphate adenylyltransferase  25.79 
 
 
416 aa  105  1e-21  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.620576  n/a   
 
 
-
 
NC_007520  Tcr_0508  glucose-1-phosphate adenylyltransferase  25 
 
 
422 aa  105  2e-21  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
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