More than 300 homologs were found in PanDaTox collection
for query gene Cthe_3167 on replicon NC_009012
Organism: Clostridium thermocellum ATCC 27405



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009012  Cthe_3167  glucose-1-phosphate adenylyltransferase, GlgD subunit  100 
 
 
373 aa  768    Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_3400  glucose-1-phosphate adenylyltransferase, GlgD subunit  64.61 
 
 
372 aa  509  1e-143  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000110141  n/a   
 
 
-
 
NC_010483  TRQ2_0709  glucose-1-phosphate adenylyltransferase, GlgD subunit  49.04 
 
 
370 aa  375  1e-103  Thermotoga sp. RQ2  Bacteria  normal  0.633346  n/a   
 
 
-
 
NC_009486  Tpet_0685  glucose-1-phosphate adenylyltransferase, GlgD subunit  49.04 
 
 
379 aa  375  1e-103  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0242  glucose-1-phosphate adenylyltransferase, GlgD subunit  48.12 
 
 
371 aa  360  3e-98  Thermosipho melanesiensis BI429  Bacteria  normal  0.793058  n/a   
 
 
-
 
NC_009718  Fnod_1506  glucose-1-phosphate adenylyltransferase, GlgD subunit  51.59 
 
 
371 aa  350  2e-95  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0908  glucose-1-phosphate adenylyltransferase, GlgD subunit  45.7 
 
 
373 aa  330  3e-89  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0820  glucose-1-phosphate adenylyltransferase, GlgD subunit  42.55 
 
 
372 aa  308  1.0000000000000001e-82  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.239013 
 
 
-
 
NC_009253  Dred_1456  glucose-1-phosphate adenylyltransferase, GlgD subunit  43.32 
 
 
371 aa  302  8.000000000000001e-81  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_06910  glucose-1-phosphate adenylyltransferase, GlgD subunit  43.05 
 
 
367 aa  295  6e-79  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0946  glucose-1-phosphate adenylyltransferase  41.57 
 
 
416 aa  295  6e-79  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.807387  normal  0.432603 
 
 
-
 
NC_011831  Cagg_3797  glucose-1-phosphate adenylyltransferase  39.44 
 
 
417 aa  292  6e-78  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.0418315 
 
 
-
 
NC_010483  TRQ2_0708  glucose-1-phosphate adenylyltransferase  40.72 
 
 
423 aa  290  3e-77  Thermotoga sp. RQ2  Bacteria  normal  0.810772  n/a   
 
 
-
 
NC_009486  Tpet_0684  glucose-1-phosphate adenylyltransferase  39.61 
 
 
423 aa  285  1.0000000000000001e-75  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0909  glucose-1-phosphate adenylyltransferase  41.01 
 
 
418 aa  281  1e-74  Petrotoga mobilis SJ95  Bacteria  normal  0.751771  n/a   
 
 
-
 
NC_009523  RoseRS_3699  glucose-1-phosphate adenylyltransferase  40.73 
 
 
417 aa  280  2e-74  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00250611  normal  0.0813218 
 
 
-
 
NC_009972  Haur_4717  glucose-1-phosphate adenylyltransferase  38.02 
 
 
415 aa  280  3e-74  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.127421  n/a   
 
 
-
 
NC_008262  CPR_0086  glucose-1-phosphate adenylyltransferase  39.73 
 
 
388 aa  279  4e-74  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1505  glucose-1-phosphate adenylyltransferase  39.35 
 
 
415 aa  278  1e-73  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_3166  glucose-1-phosphate adenylyltransferase  40.44 
 
 
426 aa  276  6e-73  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0241  glucose-1-phosphate adenylyltransferase  38.78 
 
 
412 aa  273  2.0000000000000002e-72  Thermosipho melanesiensis BI429  Bacteria  normal  0.558186  n/a   
 
 
-
 
NC_013411  GYMC61_0559  glucose-1-phosphate adenylyltransferase  41.41 
 
 
360 aa  272  7e-72  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013515  Smon_0782  Nucleotidyl transferase  39.33 
 
 
417 aa  267  2e-70  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_3798  Nucleotidyl transferase  37.6 
 
 
413 aa  265  1e-69  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.136621 
 
 
-
 
NC_011898  Ccel_3401  glucose-1-phosphate adenylyltransferase  38.01 
 
 
426 aa  265  1e-69  Clostridium cellulolyticum H10  Bacteria  normal  0.0552961  n/a   
 
 
-
 
NC_010718  Nther_0561  glucose-1-phosphate adenylyltransferase  38.29 
 
 
389 aa  263  3e-69  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_004116  SAG0854  glucose-1-phosphate adenylyltransferase  38.57 
 
 
379 aa  261  8.999999999999999e-69  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0620001  n/a   
 
 
-
 
NC_009674  Bcer98_3503  glucose-1-phosphate adenylyltransferase  40 
 
 
376 aa  261  1e-68  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4709  glucose-1-phosphate adenylyltransferase  39.01 
 
 
376 aa  261  1e-68  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5027  glucose-1-phosphate adenylyltransferase  38.46 
 
 
376 aa  259  4e-68  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0239  glucose-1-phosphate adenylyltransferase  39 
 
 
367 aa  259  4e-68  Bacillus cereus G9842  Bacteria  normal  0.440264  normal 
 
 
-
 
NC_011725  BCB4264_A4998  glucose-1-phosphate adenylyltransferase  39 
 
 
367 aa  259  4e-68  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4760  glucose-1-phosphate adenylyltransferase  38.46 
 
 
376 aa  259  7e-68  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4598  glucose-1-phosphate adenylyltransferase  38.46 
 
 
376 aa  259  7e-68  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4620  glucose-1-phosphate adenylyltransferase  38.46 
 
 
376 aa  259  7e-68  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5122  glucose-1-phosphate adenylyltransferase  38.46 
 
 
376 aa  259  7e-68  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5008  glucose-1-phosphate adenylyltransferase  39 
 
 
367 aa  259  7e-68  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2144  Nucleotidyl transferase  38.53 
 
 
418 aa  258  9e-68  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0642356  n/a   
 
 
-
 
NC_011773  BCAH820_4979  glucose-1-phosphate adenylyltransferase  39 
 
 
367 aa  258  1e-67  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008527  LACR_0724  glucose-1-phosphate adenylyltransferase  35.47 
 
 
380 aa  257  2e-67  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1455  glucose-1-phosphate adenylyltransferase  37.75 
 
 
399 aa  258  2e-67  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3698  nucleotidyl transferase  37.68 
 
 
415 aa  257  3e-67  Roseiflexus sp. RS-1  Bacteria  normal  0.526056  normal  0.0360642 
 
 
-
 
NC_013171  Apre_0868  glucose-1-phosphate adenylyltransferase  36.83 
 
 
377 aa  256  4e-67  Anaerococcus prevotii DSM 20548  Bacteria  hitchhiker  0.00134562  n/a   
 
 
-
 
NC_013165  Shel_17050  glucose-1-phosphate adenylyltransferase, GlgD subunit  33.95 
 
 
375 aa  256  6e-67  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0557  glucose-1-phosphate adenylyltransferase  35.87 
 
 
393 aa  254  2.0000000000000002e-66  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.920393  n/a   
 
 
-
 
NC_013165  Shel_17060  glucose-1-phosphate adenylyltransferase  36.17 
 
 
399 aa  253  3e-66  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_0819  glucose-1-phosphate adenylyltransferase  38.81 
 
 
402 aa  253  5.000000000000001e-66  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.24156 
 
 
-
 
NC_013203  Apar_1049  glucose-1-phosphate adenylyltransferase  35.75 
 
 
382 aa  252  9.000000000000001e-66  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2061  glucose-1-phosphate adenylyltransferase  36.97 
 
 
439 aa  251  1e-65  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.518394 
 
 
-
 
NC_009767  Rcas_0947  nucleotidyl transferase  37.57 
 
 
415 aa  249  5e-65  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.45534 
 
 
-
 
NC_010184  BcerKBAB4_4708  glucose-1-phosphate adenylyltransferase, GlgD subunit  38.59 
 
 
340 aa  248  1e-64  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4716  nucleotidyl transferase  34.63 
 
 
407 aa  245  6.999999999999999e-64  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.950002  n/a   
 
 
-
 
NC_007298  Daro_0585  glucose-1-phosphate adenylyltransferase  36.41 
 
 
440 aa  245  6.999999999999999e-64  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.920968 
 
 
-
 
NC_012034  Athe_0556  glucose-1-phosphate adenylyltransferase, GlgD subunit  34.22 
 
 
380 aa  245  9.999999999999999e-64  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4597  glucose-1-phosphate adenylyltransferase (ADP-glucose pyrophosphorylase)  38.04 
 
 
344 aa  244  1.9999999999999999e-63  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4619  glycogen biosynthesis protein  38.04 
 
 
344 aa  244  1.9999999999999999e-63  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4997  glycogen biosynthesis protein GlgD  38.04 
 
 
344 aa  244  1.9999999999999999e-63  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0240  glycogen biosynthesis protein GlgD  38.04 
 
 
344 aa  243  3e-63  Bacillus cereus G9842  Bacteria  normal  0.167791  normal 
 
 
-
 
NC_011773  BCAH820_4978  glycogen biosynthesis protein GlgD  37.77 
 
 
344 aa  242  7.999999999999999e-63  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_5026  glycogen biosynthesis protein GlgD  37.77 
 
 
344 aa  242  9e-63  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5007  glycogen biosynthesis protein GlgD  37.77 
 
 
344 aa  242  9e-63  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4759  glycogen biosynthesis protein GlgD  37.77 
 
 
344 aa  241  2e-62  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5121  glycogen biosynthesis protein GlgD  37.77 
 
 
344 aa  241  2e-62  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_06920  glucose-1-phosphate adenylyltransferase  35.85 
 
 
390 aa  240  2.9999999999999997e-62  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3198  glucose-1-phosphate adenylyltransferase  36.49 
 
 
398 aa  238  1e-61  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3502  glucose-1-phosphate adenylyltransferase, GlgD subunit  35.87 
 
 
340 aa  236  3e-61  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0087  glucose-1-phosphate adenylyltransferase, GlgD subunit  35.12 
 
 
368 aa  236  4e-61  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0959  glucose-1-phosphate adenylyltransferase  35.64 
 
 
422 aa  234  1.0000000000000001e-60  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.256851 
 
 
-
 
NC_007614  Nmul_A0718  glucose-1-phosphate adenylyltransferase  33.86 
 
 
425 aa  234  2.0000000000000002e-60  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.917503  n/a   
 
 
-
 
NC_013889  TK90_1529  glucose-1-phosphate adenylyltransferase  33.51 
 
 
421 aa  233  4.0000000000000004e-60  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.000116874 
 
 
-
 
NC_013411  GYMC61_0560  glucose-1-phosphate adenylyltransferase, GlgD subunit  36.76 
 
 
344 aa  233  6e-60  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007520  Tcr_0508  glucose-1-phosphate adenylyltransferase  34.67 
 
 
422 aa  229  6e-59  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2084  glucose-1-phosphate adenylyltransferase  33.42 
 
 
439 aa  227  2e-58  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0655  glucose-1-phosphate adenylyltransferase  35.01 
 
 
423 aa  228  2e-58  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.188651  normal  0.102422 
 
 
-
 
NC_008789  Hhal_1106  glucose-1-phosphate adenylyltransferase  32.8 
 
 
421 aa  227  2e-58  Halorhodospira halophila SL1  Bacteria  normal  0.495993  n/a   
 
 
-
 
NC_009484  Acry_0131  glucose-1-phosphate adenylyltransferase  32.89 
 
 
423 aa  226  4e-58  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2073  glucose-1-phosphate adenylyltransferase  33.24 
 
 
421 aa  225  1e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.755782  n/a   
 
 
-
 
NC_009456  VC0395_0637  glucose-1-phosphate adenylyltransferase  36.8 
 
 
407 aa  224  2e-57  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1433  glucose-1-phosphate adenylyltransferase  32.72 
 
 
421 aa  224  2e-57  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0905  glucose-1-phosphate adenylyltransferase  35.01 
 
 
423 aa  223  4e-57  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.693448  n/a   
 
 
-
 
NC_013422  Hneap_0776  glucose-1-phosphate adenylyltransferase  32.63 
 
 
423 aa  222  7e-57  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1474  glucose-1-phosphate adenylyltransferase  34.42 
 
 
424 aa  222  8e-57  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05944  glucose-1-phosphate adenylyltransferase  36.55 
 
 
404 aa  222  8e-57  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_3197  glucose-1-phosphate adenylyltransferase, GlgD subunit  34.56 
 
 
372 aa  222  8e-57  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1368  glucose-1-phosphate adenylyltransferase  33.07 
 
 
427 aa  220  1.9999999999999999e-56  Methylobacillus flagellatus KT  Bacteria  normal  0.782994  normal 
 
 
-
 
NC_011138  MADE_02421  glucose-1-phosphate adenylyltransferase  34.22 
 
 
431 aa  219  7e-56  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.962806  n/a   
 
 
-
 
NC_008577  Shewana3_2931  glucose-1-phosphate adenylyltransferase  33.78 
 
 
420 aa  216  4e-55  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2755  glucose-1-phosphate adenylyltransferase  33.78 
 
 
420 aa  216  5e-55  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2833  glucose-1-phosphate adenylyltransferase  33.78 
 
 
420 aa  216  5e-55  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1251  glucose-1-phosphate adenylyltransferase  33.07 
 
 
420 aa  216  5e-55  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2450  glucose-1-phosphate adenylyltransferase  34.92 
 
 
422 aa  216  7e-55  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000209  glucose-1-phosphate adenylyltransferase  36 
 
 
405 aa  215  9e-55  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1498  glucose-1-phosphate adenylyltransferase  33.51 
 
 
420 aa  214  1.9999999999999998e-54  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_3024  glucose-1-phosphate adenylyltransferase  32.89 
 
 
420 aa  214  1.9999999999999998e-54  Shewanella baltica OS223  Bacteria  normal  0.823168  normal 
 
 
-
 
NC_012880  Dd703_0279  glucose-1-phosphate adenylyltransferase  31.14 
 
 
427 aa  214  1.9999999999999998e-54  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1324  glucose-1-phosphate adenylyltransferase  32.89 
 
 
420 aa  214  1.9999999999999998e-54  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1889  glucose-1-phosphate adenylyltransferase  31.85 
 
 
422 aa  214  1.9999999999999998e-54  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.350932 
 
 
-
 
NC_009636  Smed_2741  glucose-1-phosphate adenylyltransferase  31.58 
 
 
419 aa  213  2.9999999999999995e-54  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1334  glucose-1-phosphate adenylyltransferase  32.89 
 
 
420 aa  214  2.9999999999999995e-54  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1360  glucose-1-phosphate adenylyltransferase  32.89 
 
 
420 aa  213  3.9999999999999995e-54  Shewanella baltica OS195  Bacteria  normal  normal  0.279951 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>