Gene Shewana3_2931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2931 
SymbolglgC 
ID4478935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3515528 
End bp3516790 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content52% 
IMG OID639727536 
Productglucose-1-phosphate adenylyltransferase 
Protein accessionYP_870563 
Protein GI117921371 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0448] ADP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR02091] glucose-1-phosphate adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAATG TACGTTATAT CAGTAATTTA ACTCGTGAAA CCTATGCATT GATTTTGGCT 
GGTGGCCGAG GCTCGCGTTT ACATGAACTC ACCGACTGGC GCGCTAAACC CGCGCTGTAT
TTCGGTGGTA AGTTTAGGAT CATCGATTTT CCGCTGTCGA ATTGCATCAA CTCGGGGATC
CGCCGCGTTG GGGTGGTGAC CCAATATAAG TCGCACTCAC TAATTCGCCA CGTGATGCGT
GGTTGGGGCC ACTTTAAAAA GGAATTAGGT GAATCGGTGG AGATTCTGCC CGCCTCACAA
CGTTACTCTG AGAATTGGTA TCAAGGCACG GCTGACGCGG TATTCCAAAA TATCGACATC
ATCCGCCATG AGCTGCCCAA GTACGTGATG GTGCTGTCGG GTGACCATGT CTATCGCATG
GATTACGCTG GCTTACTGGC CGCCCATGCC GAGTCCGGCG CCGATATGAC AGTCTCCTGC
CTCGAGGTGC CTGTGGCCGA GGCGGCGGGT GCATTTGGGG TGATGGAGGT CGATGACGAG
ATGCGCATCC TAGGATTTGA AGAAAAACCC AAGCATCCTA AACACTCCCC TGGCAATCCC
GAGAAGTGCC TCGCCTCGAT GGGCAACTAT GTGTTTAACA CAGAGTTTTT GTTCGAACAG
TTGAAGAAAG ATGCACAAAA CGCCAATTCC GATCGCGATT TTGGCAAAGA CATTATTCCC
TCGATCATCG AAAAACATAA AGTGTTTGCT TATCCCTTTA AGAGCGCCTT CCCCAATGAG
CAAGCCTACT GGCGCGATGT GGGCACCTTG GATTCCTTCT GGCAGGCCAA TATGGAATTG
TTATCGCCCA CGCCCGCCTT AAACCTCTAC GATGCCAAAT GGCCGATTTG GACCTATCAG
GAGCAATTGC CGCCTGCTAA GTTTGTGTTC GACGATGACG ATAGACGCGG CATGGCGGTG
GATTCGATTA TTTCCGGCGG CTGTATTATC TCGGGCGCGA CCGTGCGCCG CAGCGTATTG
TTTAACGAGG TGCGGGTCTG TTCCTACTCA GTGGTTGAGG ATTCGGTGGT GCTGCCCGAC
GTGGTGGTGC TGCGCCACTG TAAGATTAAA AACGCCATCA TCGACAGGGG CTGCATCATC
CCCGAAGGCA CAGTGATTGG TTATAACCAC GACCATGACA GGGCAAAAGG CTTTAGGGTG
TCCGAGAAAG GCATCACCTT AGTCACCCGC GATATGTTAG GGCTACCCGT GGGCTATGAG
TAA
 
Protein sequence
MSNVRYISNL TRETYALILA GGRGSRLHEL TDWRAKPALY FGGKFRIIDF PLSNCINSGI 
RRVGVVTQYK SHSLIRHVMR GWGHFKKELG ESVEILPASQ RYSENWYQGT ADAVFQNIDI
IRHELPKYVM VLSGDHVYRM DYAGLLAAHA ESGADMTVSC LEVPVAEAAG AFGVMEVDDE
MRILGFEEKP KHPKHSPGNP EKCLASMGNY VFNTEFLFEQ LKKDAQNANS DRDFGKDIIP
SIIEKHKVFA YPFKSAFPNE QAYWRDVGTL DSFWQANMEL LSPTPALNLY DAKWPIWTYQ
EQLPPAKFVF DDDDRRGMAV DSIISGGCII SGATVRRSVL FNEVRVCSYS VVEDSVVLPD
VVVLRHCKIK NAIIDRGCII PEGTVIGYNH DHDRAKGFRV SEKGITLVTR DMLGLPVGYE