| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1505 |
|---|
| Symbol | glgC |
|---|
| ID | 5453246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 1634672 |
|---|
| End bp | 1635919 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640875278 |
|---|
| Product | glucose-1-phosphate adenylyltransferase |
|---|
| Protein accession | YP_001411005 |
|---|
| Protein GI | 154250180 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACG TTATAGGATT GATTCTTGCA GGTGGTCAAG GAACCAGACT TGGAGTATTG
ACCGAGAAAA TCCCCAAACC AGCAGTTCAA TTTGGTGGAA AATATAGAAT AATAGATTTT
ACTTTAAGTA ATTGTGTTAA TTCTGGTATT TATAGAATAG GTGTCCTCAC TCAGTATAGA
CCACACCTTT TAAATAAGCA TATCGGCATA GGTAAACCTT GGGACCTTGA TAGAAAAGGT
GGCGGTGTTA CTATACTTCA ACCATATTCA ACACTTACAG AAAGCGTATG GTACAAAGGA
ACAGCTGATG CAGTTTATCA AAACATTGAA TTTGTAGATG AATACAACCC TGAGTATATT
GTAGTATTGT CTGGTGATCA TATATATTCA ATGGATTACA GTGAATTTGT TTACTACCAT
ATATCCAAAG GTGCTTTAGC TACAATCGCT TGCATGGAGG TACCTATAAC AGAAGCACAT
AGATTTGGAA TAATGGTAAC AGATATCGAA AATAAAATTA TCGAATTTCA AGAGAAACCA
AAAAATCCAA AATCTAACCT TGCCTCACTT GGAATTTATG TCTTCACCTG GAATTTTATA
AAAGAAGTAC TCATAGAAGA TTCTAAAGAC AATTCAAGCG ATCACGATTT TGGAAAAAAT
ATAATACCCA AAATACTCTC AACTGGAAAA GTTTATGCAT ATCCATTCGA AGGTTACTGG
CAAGATGTTG GAACAATACA ATCGTACTGG GAAACCAATC TTGAACTTGT AAGACCAATA
CCTCCTTTCA ATCTACACGA TCCTAACTGG AGATTTTACA CTCGTTCAGA GGAAATGAAT
CCAGCTTACA TTTCAGAAAA TGGGAATGTT AGAAATTCCA TCATCAGTGA AGGCTGTGAA
ATATACGGCA GTGTAGAAAA TAGTGTAATT TCACAAGGAG TTTTTATAGA CGAAGGAGCA
ATAGTAAAAA ATAGCGTAAT AATGACAAAA GTAGAAGTTG GGAAAAATGT TATTATTGAA
GATGCAATCA TTGCGGAAAA CACAATAATA AAAGATGGAT GTAAAATAGG AGTCGGGCAT
TTTGCAGAGA GCAAATACGA TAAAAAGGTA TATAACTCTC CTATAACTGT TGTAGGAATG
GATAGCATAG TGGAAGAAAA CTGCAAAATA GGTAAGAATG TTGTTATTGG TAATGATAAA
ATTGTTTCAG CTAACACTGT TATAGACAGC GGTGGATATT TAATATAA
|
|---|
| Protein sequence | MKNVIGLILA GGQGTRLGVL TEKIPKPAVQ FGGKYRIIDF TLSNCVNSGI YRIGVLTQYR
PHLLNKHIGI GKPWDLDRKG GGVTILQPYS TLTESVWYKG TADAVYQNIE FVDEYNPEYI
VVLSGDHIYS MDYSEFVYYH ISKGALATIA CMEVPITEAH RFGIMVTDIE NKIIEFQEKP
KNPKSNLASL GIYVFTWNFI KEVLIEDSKD NSSDHDFGKN IIPKILSTGK VYAYPFEGYW
QDVGTIQSYW ETNLELVRPI PPFNLHDPNW RFYTRSEEMN PAYISENGNV RNSIISEGCE
IYGSVENSVI SQGVFIDEGA IVKNSVIMTK VEVGKNVIIE DAIIAENTII KDGCKIGVGH
FAESKYDKKV YNSPITVVGM DSIVEENCKI GKNVVIGNDK IVSANTVIDS GGYLI
|
|---|
| |