| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3400 |
|---|
| Symbol | |
|---|
| ID | 7311962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3948632 |
|---|
| End bp | 3949750 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643610304 |
|---|
| Product | glucose-1-phosphate adenylyltransferase, GlgD subunit |
|---|
| Protein accession | YP_002507668 |
|---|
| Protein GI | 220930759 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR02092] glucose-1-phosphate adenylyltransferase, GlgD subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000110141 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACG TAATGGGAAT AATAATGTCC GGTGGACGCA ACACAAAGCT CAAGGAGCTT
TCAACCATGC GATCCAGTCC GGCAGTGCCT GTAGGAGGTA AATACAGGGC GATAGATTTT
ATCCTTTCAA ACATGGTAAA CTCTGGAATT ACCAATATAG GTGTAATAGC ACAGTACAGT
TTCAGGTCGT TGATGGATCA CCTTGGTTCA GGCAAGGAAT GGGACCTAGA CAGAAAAACA
GATGGCCTTT TCCTTTTTCC TCCGTTTTTG TCCGATGAAG GAACTGGATG GTATAGAGGT
ACGGCTGACG CAATGTACAA CAACCTGACT TTTCTTAAAA GAAGTAATGA GGAATATGTT
CTGATTTCTC AAGGAAATTG CATATTTACC ACAACGTTTG ACGATATGCT CAAAGCCCAT
AAGGAAAAAG ATGCAGATAT AACAGTAGCG TATCGTGAGA TGAATGATAT ACCGATTGAG
GAACTGGCAA ACATGGGCAT AATGCAGCTA GACAGTTCAT CCAGAGTAAT TGATTTTCAG
GAAAAGCCAA TGCATCCTAA TACACTCAAT GGTTCGCTGG GTATTTATAT GATAAAAAGG
GAACTGTTGA TTTCCCTTCT TGAGGAAAGT GTCGCACACG GGTATTATGA CTTTGTACTT
GATATTATAA TAAAAATGCT CCATAAGCTA AAAATATACG GATATAAATA CAGCGGATAT
TGGAGAAGTA TATCTACGGT CCAGATGTAT TATAAGTGCA ATATGGAATT GCTTGACCCT
GTTGTAAACA ACGAGTTGCT GGGTAATTTG AAAATATATA CAAAGGTCAA GGATGAAGCA
CCTGCCAAAT ACAATGAAGA AGCAGAGGTT AAAAACTCCA TTATAGCAGA CGGCTGCATT
ATTGAAGGAA CAGTTGAGAA CAGCGTACTT TTCAGAGGTG TTACAGTTAA ACGAGGTGCT
GTCGTAAAAG ACAGTATTAT AATGCAGGGA AGTGTTGTTG AAGAGAATTC AGCTCTTAAC
TATGCCATAC TTGATAAAAG CGTGGTACTT TCAAAAAGCA AATGCCTTAA AGGTGAAAAG
ACATGGCCTA TTATTATCGG AAAGAATGTT GTTGTATAA
|
|---|
| Protein sequence | MKNVMGIIMS GGRNTKLKEL STMRSSPAVP VGGKYRAIDF ILSNMVNSGI TNIGVIAQYS
FRSLMDHLGS GKEWDLDRKT DGLFLFPPFL SDEGTGWYRG TADAMYNNLT FLKRSNEEYV
LISQGNCIFT TTFDDMLKAH KEKDADITVA YREMNDIPIE ELANMGIMQL DSSSRVIDFQ
EKPMHPNTLN GSLGIYMIKR ELLISLLEES VAHGYYDFVL DIIIKMLHKL KIYGYKYSGY
WRSISTVQMY YKCNMELLDP VVNNELLGNL KIYTKVKDEA PAKYNEEAEV KNSIIADGCI
IEGTVENSVL FRGVTVKRGA VVKDSIIMQG SVVEENSALN YAILDKSVVL SKSKCLKGEK
TWPIIIGKNV VV
|
|---|
| |