Gene VIBHAR_05944 details

Gene Information

• Locus tag: VIBHAR_05944
• Symbol: glgC
• ID: 5558606
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 1129536
• End bp: 1130750
• Gene Length: 1215 bp
• Protein Length: 404 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640910418
• Product: glucose-1-phosphate adenylyltransferase
• Protein accession: YP_001448064
• Protein GI: 156977158
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0448] ADP-glucose pyrophosphorylase
• TIGRFAM ID: [TIGR02091] glucose-1-phosphate adenylyltransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGACG CACTCGCTGT AATTTTAGCT GGCGGTATGG GATCAAGATT GAGCCCACTT 
ACCGATGATA GAGCCAAACC AGCCGTCCCA TTTGGTGGTA AATATCGTAT TATCGATTTC 
ACTCTAACTA ACTGTCTTCA TTCAGGTTTG AGGAAGATAT TGGTTTTAAC TCAATACAAA 
TCACACTCGC TACAAAAACA CTTGCGAGAT GGTTGGTCGA TCTTTAATCC CGAACTTGGT 
GAATACATCA CAGCCGTTCC ACCCCAAATG CGCAAAGGTG GTGCATGGTA TGAAGGCACA 
GCAGATGCTA TCTATCACAA CATGTGGTTA CTCTCTCGCA ATGATGCCAA GTATGTGGTT 
GTTCTTTCTG GTGACCATAT CTACCGCATG GATTACGCTG CGATGCTGGA AGAGCACAAA 
GAAAACGGCG CAAAACTCAC CGTTGCTTGT ATGGATGTCC CGGTAGAGGA TGCCACGGCT 
TTTGGTGTAA TGGGGATCAA AGAAAACGGC TTAGTTGAAT CCTTTATCGA GAAACCGGAG 
AACCCGCCTA CCCTGCCTGA TGACCCAACT CAGAGCCTTG CCTCTATGGG CATTTACATC 
TTTGATATGG ACGTTCTGCA GGAAGCACTA GAAGAAGATT CAAAGCTTGA AGACTCGAGC 
CATGACTTTG GAAAAGACAT CATTCCTAAG CTGATCGACA CTCAATCCGT TTACGCTTAT 
AAGTTCTGCG GTAGTAAAGG TCGTGTAGAC AAAGATTGTT ACTGGCGCGA TGTAGGGACG 
ATCGATTCTT TCTACGAGGC CAACATGGAT TTGTTAGAAC CCGTTCCACC AATGAACTTG 
TATCAGCCAA ATTGGGCAGT GCGTACTTAT GAAGCCCAAT TTCCACCAGC AAGAACCGTA 
TCATCGGCGA CAGGTAATGA AGGGATTTTT ATTAACTCCA TCATTGCCAA TGGTGTCATT 
AACTCCGGAG GTTCCGTTCA GCACTCTGTT ATCGCGTCCA ACGTTCGTAT TCAAGACAGC 
GCAACCGTCG TCGATAGTAT TATTTTCGAT GATGTTGAGG TGGGTGAAGG CTGTCAGCTC 
GTCAGTTGCA TTATTGACAA GCACGTTCGT ATTCCACCGC ACACACAAAT TGGTATCAAC 
AAAATCGAAG ACGCCAAACG ATTTCATGTA TCAGAAAAAG GGATTGTGGT TATACCTGAA 
GGCTATGAGT TCTAA 

 

Protein sequence

MQDALAVILA GGMGSRLSPL TDDRAKPAVP FGGKYRIIDF TLTNCLHSGL RKILVLTQYK 
SHSLQKHLRD GWSIFNPELG EYITAVPPQM RKGGAWYEGT ADAIYHNMWL LSRNDAKYVV 
VLSGDHIYRM DYAAMLEEHK ENGAKLTVAC MDVPVEDATA FGVMGIKENG LVESFIEKPE 
NPPTLPDDPT QSLASMGIYI FDMDVLQEAL EEDSKLEDSS HDFGKDIIPK LIDTQSVYAY 
KFCGSKGRVD KDCYWRDVGT IDSFYEANMD LLEPVPPMNL YQPNWAVRTY EAQFPPARTV 
SSATGNEGIF INSIIANGVI NSGGSVQHSV IASNVRIQDS ATVVDSIIFD DVEVGEGCQL 
VSCIIDKHVR IPPHTQIGIN KIEDAKRFHV SEKGIVVIPE GYEF