| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0560 |
|---|
| Symbol | |
|---|
| ID | 6314670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 587569 |
|---|
| End bp | 588630 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642642944 |
|---|
| Product | glucose-1-phosphate adenylyltransferase, GlgD subunit |
|---|
| Protein accession | YP_001916744 |
|---|
| Protein GI | 188585199 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR02092] glucose-1-phosphate adenylyltransferase, GlgD subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATT TAATGGGCAT AATTTATTTG AACAAACCAG AACAAGATGG AAAATTACCG
ATTTTAACTC GAAATCGGTG TATTGCCTCT TTACCAATTT GGAGTAAATT CAGACTTATT
GACTTTATTT TGACCAACAT GGTCCAGTCT GGTATTGAAA ATATTGCACT GTTATCTACT
ATTAAGTACA GAGCACTAAT CAACCACCTA CAGGGAGGAG CAGCATGGGG ACTAGATAAA
AAACGAGATG GATTATTTAT TTTCATACCC ACAATGTCCC AATCCAGCTA TAATTTAGGA
CATTTTGATT TTCAATTACT ATCCGAAAAT ATTGATCATA TTAAAAAAAG CCATCAGGAT
TATCTGGTAT TTGCGCCGGG GAATCTGGTG GGAAATATAG ATTTTCAGTG GTTATTAAAC
TTTCATAAAA AACAAGAAAA AGATATTACC TATGTAAGAC CAGGAACAGA CTATGCAAGC
TACTCAAAAG ATCTATCAGA AGATGGATAC TATCAAATGC ATCCAATTTT CTTAATAAGT
AAAAGTTTAA TGGTTAAATT AATAAGAGAA TATTATTATA CTAACTTCAA TGGATCTATC
ACAGATCTTA TGACTAGTTC TATCAGAAAT AACGGATTAA CAATTAATGA AGTTAACTAT
CCAAATCTTA ATTGTATTAC TAATATGGAA AATTATTTTA ACTTTTCCAT GAATATTTTA
GAAACACCGG AAATGCTTAC TGGTAATATG GAAGTGCCGG TTACTAAAAA AAGAGACCTC
CCTCCCACTC GATATTATGA AGGATGTGAG ATTTCACAAT CCTTGATAGC TGAAGGTTGC
CACATCAAAG GAGAAGTCAA CTCCAGCATT ATCTTTCATT CAGTCAGTAT AGAAAGAGGA
ACTCAAATTA GTAACTCAAT AATTTTTCCG GAGACTATTA TAAATGAAAA CTCGCTATTA
AATGAAGTAA TTGCTGATAA ACAGGTTTAT ATTTCCGAAA ATAAGCAATT GATAAATTCA
TCAACTAAGC CTCTAGTTTT ATCAAAACAA GCGCGAGTTT AA
|
|---|
| Protein sequence | MKDLMGIIYL NKPEQDGKLP ILTRNRCIAS LPIWSKFRLI DFILTNMVQS GIENIALLST
IKYRALINHL QGGAAWGLDK KRDGLFIFIP TMSQSSYNLG HFDFQLLSEN IDHIKKSHQD
YLVFAPGNLV GNIDFQWLLN FHKKQEKDIT YVRPGTDYAS YSKDLSEDGY YQMHPIFLIS
KSLMVKLIRE YYYTNFNGSI TDLMTSSIRN NGLTINEVNY PNLNCITNME NYFNFSMNIL
ETPEMLTGNM EVPVTKKRDL PPTRYYEGCE ISQSLIAEGC HIKGEVNSSI IFHSVSIERG
TQISNSIIFP ETIINENSLL NEVIADKQVY ISENKQLINS STKPLVLSKQ ARV
|
|---|
| |