| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2932 |
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| Symbol | glgC |
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| ID | 4174698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3554161 |
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| End bp | 3555423 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055953 |
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| Product | glucose-1-phosphate adenylyltransferase |
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| Protein accession | YP_662494 |
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| Protein GI | 109899239 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00275218 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCAATC CAAGCCCACG TTATATTAGC AACCTGACCC GAGATACCTA CGCCCTGATT
TTAGCTGGCG GAAGAGGCTC CCGACTACAC GAACTGACCG ACTGGCGGGC TAAACCCGCT
TTATATTTTG GAGGAAAATT TAGAATAATC GACTTTCCAC TATCTAACTG CATTAATTCC
GGTATTAAAC GCATAGGGGT GGTAACCCAA TATAAATCTC ATTCATTGAT CCGACACCTT
GTCAGGGGTT GGGGACATTT TAGAAAAGAA CTAGGTGAAT CAGTTGAGAT ATTACCTGCT
TCTCAACGCT CTTCAGGCAA TTGGTATGAA GGAACTGCCG ATGCGGTATT CCAAAATATC
GATATTATTC GCGATGAAAT TCCTAAATAC GTGATGATTT TATCCGGTGA CCACATATAC
AGCATGGATT ATGCGAACAT TCTTGCTCAT CATGTGGAAT CTGGCGCGAA AATGACTGTC
AGTTGTATGC CTGTACCTAT AGAAGAAGCT GCTGGTGCAT TTGGGGTCAT GTCTGTAGAC
GAAGATTATC GTATTCTTGG ATTTGAAGAA AAACCTGAGA ATCCGACTCC TTTGCCTAAC
GACCCTACCC GTTGTCTTGC CTCTATGGGT AATTACGTTT TCGACACTGA GTTTTTGTTT
GAGCATTTAA AACATGATGC GCAAAACGAA GGCTCAGAGC GTGACTTTGG CAAAGATATC
ATTCCGTCGA TTATTAAGGA TCACCCGGTA TTCGCTTATC CATTTTCAAA CGACGATGGT
GAAGTCTCTT ACTGGCGTGA TGTGGGTACA TTAGACTCAT TTTGGTTGGC CAACATGGAA
TTGGTATCGC CCAAACCTCC CCTTAATCTT TACGATAAAA AGTGGCCTAT TTGGACGTAT
CAAGAACAGT TGCCCCCCGC TAAGTTTGTC TGGGAAGAAT ACAACCGCTG CGGCGCGGCC
ATTGATTCCG TGGTCAGTGG TGGTTGCATA ATATCTGGGG CAACCGTGCG CAAGAGTTTG
TGCTTTTCTA ACGTCCACGT TCACTCCTAC AGTGAAATTG AAGAATCAGT ACTGTTACCG
GATGTAGAAA TAAAGCGAAA TTGTAAAATC AAGAAAGCAA TTATCGATCG TGGTTGTATC
GTGCCTGAAG GCACTGTCAT TGGTCATAAC CATGATGAAG ACCGAGCAAG GGGCTTCAGA
GTCACAAACA AGGGTGTTGT GTTAGTTACC CGAGAAATGT TAGGTCTGAA AGTCGGAATA
TGA
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| Protein sequence | MPNPSPRYIS NLTRDTYALI LAGGRGSRLH ELTDWRAKPA LYFGGKFRII DFPLSNCINS
GIKRIGVVTQ YKSHSLIRHL VRGWGHFRKE LGESVEILPA SQRSSGNWYE GTADAVFQNI
DIIRDEIPKY VMILSGDHIY SMDYANILAH HVESGAKMTV SCMPVPIEEA AGAFGVMSVD
EDYRILGFEE KPENPTPLPN DPTRCLASMG NYVFDTEFLF EHLKHDAQNE GSERDFGKDI
IPSIIKDHPV FAYPFSNDDG EVSYWRDVGT LDSFWLANME LVSPKPPLNL YDKKWPIWTY
QEQLPPAKFV WEEYNRCGAA IDSVVSGGCI ISGATVRKSL CFSNVHVHSY SEIEESVLLP
DVEIKRNCKI KKAIIDRGCI VPEGTVIGHN HDEDRARGFR VTNKGVVLVT REMLGLKVGI
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