| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1048 |
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| Symbol | |
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| ID | 8413921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1187602 |
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| End bp | 1188705 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022637 |
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| Product | glucose-1-phosphate adenylyltransferase, GlgD subunit |
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| Protein accession | YP_003180067 |
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| Protein GI | 257784850 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR02092] glucose-1-phosphate adenylyltransferase, GlgD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGG TAATTGGACT TATTACCTGT AATTATGCTT CTACTAATAT GGAAATCGCT
TGTGATGTAC GCCCAATCGC ATCTATGCCT TTTTTGGGAA GATATCGTCT GGTAGATTTT
TCTCTTTCAA ACATGGTTAA TTCGGGCATT AGTACCGTTG GTGTAATCAT GCCATTTAAT
TACCGCTCGC TCATTGATCA TCTTGGTTCC GGCAAAGACT GGAACCTGGA TCGCAAGAAT
GGTGGTCTGT TTATTCTGCC TGGATCTGCT TTTGGTACTT CTCATACAGG AGCTCGTTTC
CTGCTCAGAG ATCTAATTTC CAATAGGCCA TATCTTGAGC GCGCTGATGC AGAATATGTT
CTTTTGTCTA CCTCAAACTT TGTTTTCAAC GCTGATCTTA CAGAGCTATT TGATCAGCAC
TTGGAATCTG GTGCAGACAT CACAATGATG ACTTATACCG CTCGTTATAA CGATAGAGAC
GTTGTTGGTG TTGAGCTTGA TGGGGAGCGT GTAGTTAAGA CACATAATGG TGTTCAGCGA
GGAGATGAAG CTTCTCTTGA CTGCTTTATT ATCAAGCACG ACCTGCTTAT CGACATGCTT
GATTGGTATA GCGCTACTGA TTATCTTGAC CTCTTTGAGG CACTTCATGC TGACTACAAC
CGTGTCAAGG TTCGCACCTT CCACTTTGAA GGTCATGTAG CATCTATTTT CTCTAAGAAC
TCTTACTATC TTGCCAACAT GGAACTGCTG AATCCCATGC CTTCAAATGA GCTCTTTACT
TCGGAACGCT CCATTAAGAC AAAAGCACAC GATACTGCCC CAGCAAAGTT TGAGGTTGGT
TCTAAGGTTA GTAACTCCAC TATTTCTGCA GGTTGTCGTA TTCGCGGTTC TGTCACTGGG
TCCATCCTTA GTCGTAATGT CATTATTGAG CGCGGTGCTG TTGTGCGTGA TTCTGTTGTG
ATGGAAGGAT GTATTGTTAA AGAGGGCTCA GTAGTTGAGC ACGCTATTGT AGACCGCTCT
AACATCATTC CTGCAGGTAC TGAGCTTCGC GGTACTAGTG AAGAAATTCT TATTCAGCGT
AAAAATAATA AGAGGGTGGC TTAA
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| Protein sequence | MKKVIGLITC NYASTNMEIA CDVRPIASMP FLGRYRLVDF SLSNMVNSGI STVGVIMPFN
YRSLIDHLGS GKDWNLDRKN GGLFILPGSA FGTSHTGARF LLRDLISNRP YLERADAEYV
LLSTSNFVFN ADLTELFDQH LESGADITMM TYTARYNDRD VVGVELDGER VVKTHNGVQR
GDEASLDCFI IKHDLLIDML DWYSATDYLD LFEALHADYN RVKVRTFHFE GHVASIFSKN
SYYLANMELL NPMPSNELFT SERSIKTKAH DTAPAKFEVG SKVSNSTISA GCRIRGSVTG
SILSRNVIIE RGAVVRDSVV MEGCIVKEGS VVEHAIVDRS NIIPAGTELR GTSEEILIQR
KNNKRVA
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