14 homologs were found in PanDaTox collection
for query gene Xaut_0987 on replicon NC_009720
Organism: Xanthobacter autotrophicus Py2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009720  Xaut_0987  hypothetical protein  100 
 
 
704 aa  1400    Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2936  hypothetical protein  25.61 
 
 
677 aa  168  4e-40  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.771094 
 
 
-
 
NC_006369  lpl1071  hypothetical protein  20.75 
 
 
657 aa  134  6.999999999999999e-30  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011757  Mchl_3304  hypothetical protein  24.57 
 
 
685 aa  105  3e-21  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.132178  normal 
 
 
-
 
NC_009656  PSPA7_6042  methyl-accepting chemotaxis protein  24.13 
 
 
708 aa  89.7  2e-16  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3785  hypothetical protein  20.4 
 
 
696 aa  85.1  0.000000000000004  Shewanella sp. ANA-3  Bacteria  normal  normal  0.546108 
 
 
-
 
NC_009801  EcE24377A_0285  hypothetical protein  20.49 
 
 
739 aa  71.6  0.00000000005  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003239  hypothetical protein  21.11 
 
 
706 aa  68.2  0.0000000006  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4618  hypothetical protein  21.5 
 
 
730 aa  67.4  0.0000000008  Pseudomonas putida F1  Bacteria  normal  0.128897  hitchhiker  0.000000815627 
 
 
-
 
NC_008639  Cpha266_2232  hypothetical protein  25.87 
 
 
261 aa  65.5  0.000000003  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1362  hypothetical protein  21.93 
 
 
706 aa  62  0.00000003  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008757  Pnap_4267  hypothetical protein  20.44 
 
 
816 aa  53.5  0.00001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.234746  normal 
 
 
-
 
NC_012791  Vapar_4588  putative methyl-accepting chemotaxis sensory transducer  21.44 
 
 
667 aa  51.6  0.00005  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2247  hypothetical protein  23.87 
 
 
1705 aa  46.6  0.002  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
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