Gene VC0395_A1362 details

Gene Information

• Locus tag: VC0395_A1362
• ID: 5136874
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 1456728
• End bp: 1458848
• Gene Length: 2121 bp
• Protein Length: 706 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640532820
• Product: hypothetical protein
• Protein accession: YP_001217305
• Protein GI: 147675323

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGATA GCCTTAATCT TTCCAGCTTA TGGCCAGACT TGAGCAGTCT AAATGTAATG 
CCACCTCAAA CTCCTGAGCA ATTGAGTGCT TTGTTTGTGG TTATTTTATG GGGTGTCGCT 
CTATTTTTCT TAATTTGGTC AGTTGCTGCA TTTATTCGCG CAAGACAACG AGTAGTTTGG 
CTTAACAAAT CTTTGGATGA TGCGGAGAAA TCGACTCTGT CAGGTGTTCG AAATGATTTA 
ATTTCTAGAG CTGAACAAAA AAAAGATTCA GTAGGGCATT TATGGCTCGA GTTTGATGAA 
ACATTGCTTG AAGTAAAAGG TGCTGATGAC GTTGTTCGAT TGCATAACAC ATTTGATGCT 
GACTATTTTT TTAATAGTTC TAGTTTAGCT GGTGGTAGTA CTGAAAACAG AATGATTGCG 
GTGGTTCCAG GCTTTTTAAC GGCTCTGGGT GTTATTGGTA CTTTTGTCGG TTTACAGCTA 
GGACTTTCAG ATCTCAATAT CGCGGGCAAC GTTGATGTCA ATGAAATGAA AAATGGCGTT 
GCTGGAGTTA TAAATGGTGC AAAAATCGCA TTTATGACAT CGGTTTGGGG CGTGCTACTC 
AGTGTTGCAT TTAATTTCAT TGAGAAGATA CTTGAGCAAA TTATTAGAAA GAAAATTAAG 
TCTTTGCAAA ACCGTATTGA CAGGATGTTC CCTCGATTAA GTGCGGAATA TCAACTGCAA 
TCTATTGCAA ATAACAGCCA GCAATCTCGA GAAAGCCTAC AAGGACTTGC TGAGAAAATA 
GGCGAGAAAA TGCAGGAGTC ACTCATTCAG GCAACTCAGG GTATTCAACA AGGTCTCGAG 
AGTAGTCTGG AAAAAATCAT GGCTCCGGCT ATCAATAAGC TCGTTGACGA AACATCTGAC 
GGGAATCAAA AAGCACTGGA AAGCGTTCTT CAATCTTTCA TGGAGGGTTT TGGTCAACAA 
GGCGAACAAC AACGTGTCGC GATGGACTCT GCGTCTCAAA ACGTAAATAA GACGCTAGAA 
TCAATGAGCG TTTCGATGGC TGCTTTCGTC AATAAGTTGG AAGTTCAGCA AAACGCATCT 
TCAGAAAGAG AGAAAGAACT GATCTCAACT ATTTCAGTTC AAGTTTCTGA GCTAGTTACT 
CAGGGTAATG AGCAGAAGCG TGTTCTAACA GAGTTTGTAG AAAAACAAGT CTCAGAGTTA 
GGTGAGCAGC TTACTAAAAG AGAATTAGCT GCTTCTGAAC GTGAACAGAA ATTGGCTTCC 
TCAATGGAAA GTACGATTAA AGATTTAGTA GAAAATGTTT CAGCACAAAG CCAAGTCTTG 
ACCGATTTTG TTCAGAATCA AGTTGTCCAA CTTACCCAAA CGTTCTCCGA ACGAGATGGA 
ATGGCAAGTC AGATGGAAAA AGAGCGTAAT GATATATTTG TGAATCAAAC GCAGGCGATG 
AAAGCTGGAA CGGATGAGCT TCTTGCTCAA GTGAAAGCGG CGACTGAATC ACAACAAATC 
ACAACTAATA GTATTATTGA GCAAGGTAAA CAATTACAAA ATAGTATCGA TTCCTCTGTT 
TCGGCATCTG CTCGAGCTAC GGAGAGTATG CAGCAGTCGG CGAATGAGTT ACGAGTTGCC 
GCTGATAGTA TGAATGTGTT TGGTTCCAAC ATCAAAGATG CGGGCAACAA ACTATCTGGT 
GCTGTTACTG AAGCGGTTAA CAGCACGAAG GATTTAGCGG AACAAAACCA TCTAGGCGCA 
GTGAAAGTTC AAGCGTTGAG GGAGCAGTTG CTGGAAGATA CAAGTAAGTT TAGCGCGATT 
GCAGATCAGA TAAACAATAT GCTGATTAGT GCAGAACAGT CGTTTAGCAC GCTTCGTACT 
ACCCAAAATG AGTTCCTTGC AGAACAAAAA GGTAATCTAA ACGAACTCAC TTCAGAAATG 
AAACGTAATG TGAAAGAGTT GACGGAGCAA ATGGCTCAAC TGCTTGAAGA TTACGCAGAG 
CAAGCCAATG GACAAACCGC CGAGCACCTC AAAGTTTGGG CCAATAGTAG CACACAATAT 
GCAGAGAGCA TGAATACAGC AGTTAGAGCT ATTTCTAGTG TTGTCGATGA AATTCAAGAT 
AAAGTGAGCC AACATGCGTA G 

 

Protein sequence

MTDSLNLSSL WPDLSSLNVM PPQTPEQLSA LFVVILWGVA LFFLIWSVAA FIRARQRVVW 
LNKSLDDAEK STLSGVRNDL ISRAEQKKDS VGHLWLEFDE TLLEVKGADD VVRLHNTFDA 
DYFFNSSSLA GGSTENRMIA VVPGFLTALG VIGTFVGLQL GLSDLNIAGN VDVNEMKNGV 
AGVINGAKIA FMTSVWGVLL SVAFNFIEKI LEQIIRKKIK SLQNRIDRMF PRLSAEYQLQ 
SIANNSQQSR ESLQGLAEKI GEKMQESLIQ ATQGIQQGLE SSLEKIMAPA INKLVDETSD 
GNQKALESVL QSFMEGFGQQ GEQQRVAMDS ASQNVNKTLE SMSVSMAAFV NKLEVQQNAS 
SEREKELIST ISVQVSELVT QGNEQKRVLT EFVEKQVSEL GEQLTKRELA ASEREQKLAS 
SMESTIKDLV ENVSAQSQVL TDFVQNQVVQ LTQTFSERDG MASQMEKERN DIFVNQTQAM 
KAGTDELLAQ VKAATESQQI TTNSIIEQGK QLQNSIDSSV SASARATESM QQSANELRVA 
ADSMNVFGSN IKDAGNKLSG AVTEAVNSTK DLAEQNHLGA VKVQALREQL LEDTSKFSAI 
ADQINNMLIS AEQSFSTLRT TQNEFLAEQK GNLNELTSEM KRNVKELTEQ MAQLLEDYAE 
QANGQTAEHL KVWANSSTQY AESMNTAVRA ISSVVDEIQD KVSQHA