Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3785 |
Symbol | |
ID | 4479995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4544823 |
End bp | 4546913 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639728398 |
Product | hypothetical protein |
Protein accession | YP_871409 |
Protein GI | 117922217 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.546108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACAG AAAGACAAAT TGAACTTTCT TGGCTTTTAC CAGATTTTTC TCATCTAAGT TTTCATCCTC AAACTGGAAC GGCTTTAAGC AGTTTATTTG TCGCAATAAC CTTGACCGTA ACATTACTTT TCATAGCTTA CCTGCTCTAC AAAAGCATTG ATGTTGTATT AAAAATCAAT TGGTTGCAGA AAGCGTTAGA GCCTTTAGAG AGAAAGGATG TTGCTCAAAA GAAGGAGGTG CTCTATCAGT TAGCAAAGTC AAAGAGTAAA GGGAAAAGTA AAGGAATTGG CTTTTTATGG ATGGAATTTG ATGAAACTCT TGTCGAAGTT CGAAAGGGCG ATCAAATTGA AATTCGCAAT ACTTTAGATG CAGGACATTT TTTCAATACT TACACTCTAG CTAATAGCGT AACAGAAAAT CGTCTAATCG CAGCAGTGCC CGGTTTTCTT ACAGCACTAG GGGTCATAGG CACGTTTATG GGCCTACAAC TAGGCTTGGC AGATCTTAAA CTCGGTGCAG GTGTTGATGT AACCACAATG CAAGATGGCG TTGCTGGTGT TGTAAATGGG GCTAAAATCG CATTTTTGAC ATCAGTTTGG GGGGTTGCAT TAAGTGTATT TTTTAACTTC TTTGAGAAAT TATGTGAACA ATTCATCCGC TCAAAAATTC GAGAATTAGA GGATAAAGTC GATTTCCTCT TTCCTAGAGT CCGCCCAGAA GAACAACTTC AAATAATCTC TGAAAATAGC TCTGAATCAC GTAATGTCCT TCAAGGACTG GCCGAAAAAA TTGGTGAAAA GATGCAGGAA GCCATGGTTA CGGCTACCCA AGGAATCCAA TCAAGTCTCG AAAGTAGTTT GAGCAAGATA ATGGCCCCTG CGATTAATAA GCTGGTTGAT GAGACATCTC AAGGTAATCA AAAAGCACTA GAAGGACTTC TAGAAAGTTT TATGGACCGC TTTGGTCAAG CTGGTAACCT ACAGAGAAGT GCGCTTGATG ATGTCTCAAA CAAAGTCAAT CAATCTGTAG AAGCAATGCA GCTAACAATG AGCAACTTTG TAGAACAATT ACAAAAATCA CAAGCGGAAT CGGGTGATAG AGAGAAGGCT CTCATTGCCG ATATTTCACA TCAAGTTAGT AAGTTGTCTT CCCAATCAGA AGACATCCAT CAGAAACTAA CATCCTATGT TGAAAATCAA ATAGGCAAGA TATCTTCTCA AATGCAAATC AGAGAAGAGG CTTCGGCAAA ACGTGACTCA GAATTAGTCA ACGTGATTGG ACAACAGGTC AATGAGCTAG TTAATAACTC CAGAAGGCAG GGTGAACTGC TTACCAGTTT TGTCGAAACT CAACTTAACA ACCTAACTAA GTCATTTGAC GAACGAGATA AGCGGTCAAC TGAACTCGAA ACTACGCGTA ACAATAAAAT TGAGAAGCAA ACCGAAGCGA TTGTAAAAAT ATCTAATGAA TTAATAAGCA CTGTAGAGAA ATCCGTTTCA GAGCAACTTG CTGCAGTAAA ACATCTCGTA TCGCAAGGAG AAACCCTTCA AAACAGTGTT AATGCCTCCG TTGAAGCCGC TGCTCAAGCA ACTCAAGCAA TGAAAGAATC ATCAATTGAA CTTAGAGTAT CAGCTGATCA TATGAGAGTT CTGAGTTCCC ACGTAAATGA CGCTGGCAAT AAGCTATCTG GAGCCATCAA GTCAGCTGTA GACAGCACAG CTGACTTGGC GAATCAAAAT CAAATTTCAG CACAACGGAT AGAGAATGCC CGTGAATCAC TTATGAAAGA TGTTTCACGT TTTAGTGAAC TTTCAGACCA AATTAAAGCA TTGATTACAA GTGCAAGCAG TACATTCACT GAATTAAAAT CAACACAAAG AGACTTTATC GGCAACTTAA AAGAGGAAGT TGAGAGCCTA AGTCGAAAAA TGACAGATAT GCTAGAGGAG TATTCTCAAC AAGCAAATGG ACAAACAGCA GAACACTTAA AAATCTGGTC CCAATCAGTG ACAGATTATT CAACACAAAT GAACAGTGCA GTTAAGGCAT TGTCTAGTGT CGTGGACGAA ATGCAAGTGA AACTGGGGTA G
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Protein sequence | MATERQIELS WLLPDFSHLS FHPQTGTALS SLFVAITLTV TLLFIAYLLY KSIDVVLKIN WLQKALEPLE RKDVAQKKEV LYQLAKSKSK GKSKGIGFLW MEFDETLVEV RKGDQIEIRN TLDAGHFFNT YTLANSVTEN RLIAAVPGFL TALGVIGTFM GLQLGLADLK LGAGVDVTTM QDGVAGVVNG AKIAFLTSVW GVALSVFFNF FEKLCEQFIR SKIRELEDKV DFLFPRVRPE EQLQIISENS SESRNVLQGL AEKIGEKMQE AMVTATQGIQ SSLESSLSKI MAPAINKLVD ETSQGNQKAL EGLLESFMDR FGQAGNLQRS ALDDVSNKVN QSVEAMQLTM SNFVEQLQKS QAESGDREKA LIADISHQVS KLSSQSEDIH QKLTSYVENQ IGKISSQMQI REEASAKRDS ELVNVIGQQV NELVNNSRRQ GELLTSFVET QLNNLTKSFD ERDKRSTELE TTRNNKIEKQ TEAIVKISNE LISTVEKSVS EQLAAVKHLV SQGETLQNSV NASVEAAAQA TQAMKESSIE LRVSADHMRV LSSHVNDAGN KLSGAIKSAV DSTADLANQN QISAQRIENA RESLMKDVSR FSELSDQIKA LITSASSTFT ELKSTQRDFI GNLKEEVESL SRKMTDMLEE YSQQANGQTA EHLKIWSQSV TDYSTQMNSA VKALSSVVDE MQVKLG
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