Gene Shewana3_3785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3785 
Symbol 
ID4479995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4544823 
End bp4546913 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content40% 
IMG OID639728398 
Producthypothetical protein 
Protein accessionYP_871409 
Protein GI117922217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.546108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAG AAAGACAAAT TGAACTTTCT TGGCTTTTAC CAGATTTTTC TCATCTAAGT 
TTTCATCCTC AAACTGGAAC GGCTTTAAGC AGTTTATTTG TCGCAATAAC CTTGACCGTA
ACATTACTTT TCATAGCTTA CCTGCTCTAC AAAAGCATTG ATGTTGTATT AAAAATCAAT
TGGTTGCAGA AAGCGTTAGA GCCTTTAGAG AGAAAGGATG TTGCTCAAAA GAAGGAGGTG
CTCTATCAGT TAGCAAAGTC AAAGAGTAAA GGGAAAAGTA AAGGAATTGG CTTTTTATGG
ATGGAATTTG ATGAAACTCT TGTCGAAGTT CGAAAGGGCG ATCAAATTGA AATTCGCAAT
ACTTTAGATG CAGGACATTT TTTCAATACT TACACTCTAG CTAATAGCGT AACAGAAAAT
CGTCTAATCG CAGCAGTGCC CGGTTTTCTT ACAGCACTAG GGGTCATAGG CACGTTTATG
GGCCTACAAC TAGGCTTGGC AGATCTTAAA CTCGGTGCAG GTGTTGATGT AACCACAATG
CAAGATGGCG TTGCTGGTGT TGTAAATGGG GCTAAAATCG CATTTTTGAC ATCAGTTTGG
GGGGTTGCAT TAAGTGTATT TTTTAACTTC TTTGAGAAAT TATGTGAACA ATTCATCCGC
TCAAAAATTC GAGAATTAGA GGATAAAGTC GATTTCCTCT TTCCTAGAGT CCGCCCAGAA
GAACAACTTC AAATAATCTC TGAAAATAGC TCTGAATCAC GTAATGTCCT TCAAGGACTG
GCCGAAAAAA TTGGTGAAAA GATGCAGGAA GCCATGGTTA CGGCTACCCA AGGAATCCAA
TCAAGTCTCG AAAGTAGTTT GAGCAAGATA ATGGCCCCTG CGATTAATAA GCTGGTTGAT
GAGACATCTC AAGGTAATCA AAAAGCACTA GAAGGACTTC TAGAAAGTTT TATGGACCGC
TTTGGTCAAG CTGGTAACCT ACAGAGAAGT GCGCTTGATG ATGTCTCAAA CAAAGTCAAT
CAATCTGTAG AAGCAATGCA GCTAACAATG AGCAACTTTG TAGAACAATT ACAAAAATCA
CAAGCGGAAT CGGGTGATAG AGAGAAGGCT CTCATTGCCG ATATTTCACA TCAAGTTAGT
AAGTTGTCTT CCCAATCAGA AGACATCCAT CAGAAACTAA CATCCTATGT TGAAAATCAA
ATAGGCAAGA TATCTTCTCA AATGCAAATC AGAGAAGAGG CTTCGGCAAA ACGTGACTCA
GAATTAGTCA ACGTGATTGG ACAACAGGTC AATGAGCTAG TTAATAACTC CAGAAGGCAG
GGTGAACTGC TTACCAGTTT TGTCGAAACT CAACTTAACA ACCTAACTAA GTCATTTGAC
GAACGAGATA AGCGGTCAAC TGAACTCGAA ACTACGCGTA ACAATAAAAT TGAGAAGCAA
ACCGAAGCGA TTGTAAAAAT ATCTAATGAA TTAATAAGCA CTGTAGAGAA ATCCGTTTCA
GAGCAACTTG CTGCAGTAAA ACATCTCGTA TCGCAAGGAG AAACCCTTCA AAACAGTGTT
AATGCCTCCG TTGAAGCCGC TGCTCAAGCA ACTCAAGCAA TGAAAGAATC ATCAATTGAA
CTTAGAGTAT CAGCTGATCA TATGAGAGTT CTGAGTTCCC ACGTAAATGA CGCTGGCAAT
AAGCTATCTG GAGCCATCAA GTCAGCTGTA GACAGCACAG CTGACTTGGC GAATCAAAAT
CAAATTTCAG CACAACGGAT AGAGAATGCC CGTGAATCAC TTATGAAAGA TGTTTCACGT
TTTAGTGAAC TTTCAGACCA AATTAAAGCA TTGATTACAA GTGCAAGCAG TACATTCACT
GAATTAAAAT CAACACAAAG AGACTTTATC GGCAACTTAA AAGAGGAAGT TGAGAGCCTA
AGTCGAAAAA TGACAGATAT GCTAGAGGAG TATTCTCAAC AAGCAAATGG ACAAACAGCA
GAACACTTAA AAATCTGGTC CCAATCAGTG ACAGATTATT CAACACAAAT GAACAGTGCA
GTTAAGGCAT TGTCTAGTGT CGTGGACGAA ATGCAAGTGA AACTGGGGTA G
 
Protein sequence
MATERQIELS WLLPDFSHLS FHPQTGTALS SLFVAITLTV TLLFIAYLLY KSIDVVLKIN 
WLQKALEPLE RKDVAQKKEV LYQLAKSKSK GKSKGIGFLW MEFDETLVEV RKGDQIEIRN
TLDAGHFFNT YTLANSVTEN RLIAAVPGFL TALGVIGTFM GLQLGLADLK LGAGVDVTTM
QDGVAGVVNG AKIAFLTSVW GVALSVFFNF FEKLCEQFIR SKIRELEDKV DFLFPRVRPE
EQLQIISENS SESRNVLQGL AEKIGEKMQE AMVTATQGIQ SSLESSLSKI MAPAINKLVD
ETSQGNQKAL EGLLESFMDR FGQAGNLQRS ALDDVSNKVN QSVEAMQLTM SNFVEQLQKS
QAESGDREKA LIADISHQVS KLSSQSEDIH QKLTSYVENQ IGKISSQMQI REEASAKRDS
ELVNVIGQQV NELVNNSRRQ GELLTSFVET QLNNLTKSFD ERDKRSTELE TTRNNKIEKQ
TEAIVKISNE LISTVEKSVS EQLAAVKHLV SQGETLQNSV NASVEAAAQA TQAMKESSIE
LRVSADHMRV LSSHVNDAGN KLSGAIKSAV DSTADLANQN QISAQRIENA RESLMKDVSR
FSELSDQIKA LITSASSTFT ELKSTQRDFI GNLKEEVESL SRKMTDMLEE YSQQANGQTA
EHLKIWSQSV TDYSTQMNSA VKALSSVVDE MQVKLG