| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4618 |
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| Symbol | |
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| ID | 5193126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5175259 |
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| End bp | 5177451 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640589101 |
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| Product | hypothetical protein |
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| Protein accession | YP_001269922 |
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| Protein GI | 148549820 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.128897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000815627 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATTTTT CGACGCTGCG GCACCTATGG GATGGTGCAA GCTCCGAGCA GTTGATCGCA
CCCTTAATGG TTGCTGGGTT TGTCGCCATT TTGTGCACCT TTTATTTTTT CCACTATTTC
TACAAATCTT TCGGTCTTAG CGCCCAGCTG AAGCGTTTGA TCAAAAGCTT GGAGAACGCA
AAAACAGTTC TCCCGTCAGA TCGGCGATCA GAGCTGGAGC GACTGTTCAA AGGCTCCAAT
CTGGAGCATT CGTGGCGCGA ATATGCCGAA ACGCTGCACG ACCAATACGA GCTCAAGGAA
GGCGAACAGG TAATTGGCCG ATCGCGAGCC ACCGCAGCAG CTGCACACTT CTTTTCACCG
CAAAGTGTGG TTGATACCCC GCTGGGAACC GAATTCTATA AACATCTGCC TGGCATTCTG
ACCGGGATCG GTATTGTCGG AACCTTCTTC GGCTTGATGC TAGGCCTCCA GCACTTTGAC
CCGAGCACAC CCGAACAGGT TAACGCCAGC GTCGATAAAC TATTGAAAGA CGTGTTGTTC
GCATTCTTCG GCTCTTTCAT TTCAATCATG GCCTCCATCG CTGTCACGCT CACTGAAAAG
TTGCGTTTGG GGCACTGTTA CAAGCTGCTT GAGGCACTCA ACGAAACGAT CGACGGGCTT
TTTGACAGCG GTGTCGGTGA GGAATACCTG GCTGAGCTGG TGCGCTCTAG TGCTGAAAGC
TCGGTGCAAA CCCGCCAGCT GAAGGACAGC CTGGTGACTG ATCTGCGGGA AATGTTACAG
AACCTGGTTG ATACCCAGGT CCGTGAAAGC CTCAAATTGG CAGATACCTT GTCGACGACG
TACCGCGACT CTGGGCAGCT GTTGGCCGAC CAGGTGAGCG GTGCAATCGA GAACAGCCTC
AAATCGCCGC TTGAAGCCAT CGCGGGTGCC GTGCAGGCCG CCAGTGGCGA TCAGTCCGGG
CAGGTACAGA ATCTGCTTCA GGATGTTCTG GTTGCCTTCA TGAACAAGCT GGAAGGTACG
TTCGGCCAGC AGTTCAATGG CCTGCACGAG TTGATGGGCC AGTCGGTTGC CGCCATGCAG
TCGATGCAGC AGGGCTTCTC GACGCTGATC CAGGATATGC GTTCGGCTAG CGAGTCCTCG
AATCAAAGCA GTTCGACCAT GATTGCCCAG CTACTGGCCA ATATGCAGGC AGGACAAAGC
GCCATGCAAG CCGGGATGAA CGAGATGCTC GCCAATCTTC AGGCTTCGGT TGCCCGTATC
GGCAACGAAG GAGAGGGGGC TGGCGCGCGA ATGGCCGAGC AACTGGAGAA GCTGTTCGCT
CAAAGCGAGG CTCGCCAACA GGCAATGGCT GAGAATCTCC AGGCTTTTGT CGAGTCGATC
AAGCAGAGCA TCGGCCAAGG CCAACAGGAA ACCATGGCCA AGATTGCAGG CTCGGTCGAG
GTGCTGGGTG AGCAGCTTTC TGCAGTCTTC AAGCAACTGG AACAGGGCCA GCAGCAGATG
GATCAATCCA CCCGCGCTGC CCAGGCAGAC CTGCACCAAG GTACCCGCGA ACTGGTGGGC
GGCCTCGACG AACAGGTCAA GGCGTTGCTG CAGACGGTTT CCGAGCAACA GAAGTCTGCC
CAGGACACCG TCAATGCATT GAGTGCCCAG ACTGAGCAGC ATCTGCAAAG TATGCAGCTG
GGTGCGGATA AGATGCGGGC GGCGGCTGAG CGGTTTGAAA CCGCCGGACA AAGCGTTGCG
CGAGCCAGTG AGTCGACTGC AGGGCTGATG GGTACAGTCC AGGGCGCAGG AGCTGAGCTT
GCACAGGCAT CCCGTGAGCT GAATACCGTA GTCGCGGACT ACCGGAACAA TCGTGAAGCG
CTCGCGAAAA CGCTCGCGGT CATCGAAGGG GTAGTTGCCA GTGCTCAAGG GGAAGCCAGC
GGTCGCAGTC AGTATCTCCA GGACCTGAAG GTTCAAAGCG AGCGGATGCA GGCACTTAAC
CGTGAAGTGT ATGAATACCT CGAAAACATC AGTGGTGTGC TGGGTAACGG CTTCAAGGAA
TTCGGTGAGG GTATGGACCG GGCGTTGAGG CAAACCTTGG GCAGCCTCGA CACCGAGCTC
GATAAAGCAG TCAAGAGCCT CGCTGGCGGT GTGGAAGGGG TCAAAGAAAG CCTCGAAGAC
TTCAGCGACA TCATGGAACG CATCAGGCGG TAA
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| Protein sequence | MDFSTLRHLW DGASSEQLIA PLMVAGFVAI LCTFYFFHYF YKSFGLSAQL KRLIKSLENA
KTVLPSDRRS ELERLFKGSN LEHSWREYAE TLHDQYELKE GEQVIGRSRA TAAAAHFFSP
QSVVDTPLGT EFYKHLPGIL TGIGIVGTFF GLMLGLQHFD PSTPEQVNAS VDKLLKDVLF
AFFGSFISIM ASIAVTLTEK LRLGHCYKLL EALNETIDGL FDSGVGEEYL AELVRSSAES
SVQTRQLKDS LVTDLREMLQ NLVDTQVRES LKLADTLSTT YRDSGQLLAD QVSGAIENSL
KSPLEAIAGA VQAASGDQSG QVQNLLQDVL VAFMNKLEGT FGQQFNGLHE LMGQSVAAMQ
SMQQGFSTLI QDMRSASESS NQSSSTMIAQ LLANMQAGQS AMQAGMNEML ANLQASVARI
GNEGEGAGAR MAEQLEKLFA QSEARQQAMA ENLQAFVESI KQSIGQGQQE TMAKIAGSVE
VLGEQLSAVF KQLEQGQQQM DQSTRAAQAD LHQGTRELVG GLDEQVKALL QTVSEQQKSA
QDTVNALSAQ TEQHLQSMQL GADKMRAAAE RFETAGQSVA RASESTAGLM GTVQGAGAEL
AQASRELNTV VADYRNNREA LAKTLAVIEG VVASAQGEAS GRSQYLQDLK VQSERMQALN
REVYEYLENI SGVLGNGFKE FGEGMDRALR QTLGSLDTEL DKAVKSLAGG VEGVKESLED
FSDIMERIRR
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