22 homologs were found in PanDaTox collection
for query gene Rfer_3251 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_3251  hypothetical protein  100 
 
 
264 aa  539  9.999999999999999e-153  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6720  hypothetical protein  76.83 
 
 
264 aa  425  1e-118  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3976  hypothetical protein  73.08 
 
 
260 aa  405  1.0000000000000001e-112  Dechloromonas aromatica RCB  Bacteria  normal  0.834147  normal 
 
 
-
 
NC_007951  Bxe_A3035  hypothetical protein  70.83 
 
 
264 aa  403  1e-111  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.000133593  unclonable  0.00000211782 
 
 
-
 
NC_010623  Bphy_3795  hypothetical protein  75.1 
 
 
267 aa  394  1e-109  Burkholderia phymatum STM815  Bacteria  normal  0.755435  normal 
 
 
-
 
NC_008751  Dvul_0247  extracellular solute-binding protein  21.33 
 
 
258 aa  53.5  0.000004  Desulfovibrio vulgaris DP4  Bacteria  unclonable  0.0000000342463  normal 
 
 
-
 
NC_008532  STER_1455  amino acid ABC transporter periplasmic protein  27.42 
 
 
276 aa  50.4  0.00003  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0000239011  n/a   
 
 
-
 
NC_007963  Csal_3298  extracellular solute-binding protein  23.81 
 
 
254 aa  48.1  0.0001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2029  extracellular solute-binding protein family 3  23.68 
 
 
275 aa  47.4  0.0002  Desulfohalobium retbaense DSM 5692  Bacteria  hitchhiker  0.00497658  hitchhiker  0.00148627 
 
 
-
 
NC_011769  DvMF_2787  extracellular solute-binding protein family 3  22.99 
 
 
275 aa  46.2  0.0005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009052  Sbal_3858  hypothetical protein  25.66 
 
 
257 aa  46.2  0.0006  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0537  hypothetical protein  25.48 
 
 
263 aa  45.4  0.0008  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1143  extracellular solute-binding protein  23.88 
 
 
291 aa  45.1  0.001  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00243654  normal 
 
 
-
 
NC_009674  Bcer98_2849  extracellular solute-binding protein  20.32 
 
 
261 aa  44.3  0.002  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00000542084  n/a   
 
 
-
 
NC_009997  Sbal195_0482  hypothetical protein  25 
 
 
258 aa  44.3  0.002  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3807  extracellular solute-binding protein  23.19 
 
 
255 aa  44.7  0.002  Rhodoferax ferrireducens T118  Bacteria  normal  0.0339434  n/a   
 
 
-
 
NC_008740  Maqu_3045  extracellular solute-binding protein  22.61 
 
 
252 aa  43.9  0.003  Marinobacter aquaeolei VT8  Bacteria  normal  0.29813  n/a   
 
 
-
 
NC_007948  Bpro_2725  extracellular solute-binding protein  24.64 
 
 
255 aa  43.9  0.003  Polaromonas sp. JS666  Bacteria  normal  normal  0.377172 
 
 
-
 
NC_011663  Sbal223_0485  hypothetical protein  24.78 
 
 
257 aa  43.1  0.004  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008532  STER_1454  amino acid ABC transporter periplasmic protein  23.84 
 
 
265 aa  42.7  0.006  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00353635  n/a   
 
 
-
 
NC_009714  CHAB381_1729  CjaC  25.86 
 
 
257 aa  42.4  0.007  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0461  hypothetical protein  24.34 
 
 
257 aa  42  0.01  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
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