Gene Shew185_0461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0461 
Symbol 
ID5370845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp523425 
End bp524198 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content48% 
IMG OID640828666 
Producthypothetical protein 
Protein accessionYP_001364692 
Protein GI152999011 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTGA TACTGATAAT CGTCATTTCA TGCTTATTTC TGCCCCAAGC GAGAGCAGAA 
ACCTCTGCTG TTGTCTGGCA AGCACACTGC CGCGATAGGC ATCCTGTTAT TTATTTCGAA
AATGGTGAGT GCAAAGGCCC AGGTGCTGCG GTGATCAATC AAGTTATCAC CCGTCTAGGT
CACACGGTAA ATTGGAGTAA TGTGCCTTGG GCACGCACGA TAAAAGTCGC CGAAACGGGA
CAAGTCGACC TCATTCCCGT CCATTCGATG ACACCCGAGC GCAACAATTT TCTGGACCCT
ATGCTACTGG GCTACGACAA GCGCTACGTC TATTACTTTG CCCTTGCGAA TCGACAGCTT
GAGGTCAAAA ATTTCGATGA ATTAAAGCCT TACATCATTG GCGCACTTAG AGGCGCTTTT
TACTGTCCGC AGTTCAATGA CAATCAAAAT CAACTAAAAG TGTCTTTTGT TAATGATAAC
GGCCAGTTAA TCAATATGTT GAAGGCAGAA CGTATCGATT TAGCCATCAC CTCCGAACAA
CATGAGATGC AATTCTTTGC TAAAGATCCC CAGCTTAAGC AGATGGAATA CGTCGACATC
AGCAAGAACG GCCGCTACTT CAGCATTCCG CTCATGTCGC CGCTGCATCG ACATGCCAAG
CAAGTTCACC AGATAGTCGA CGACATGCGC ACCTCAGGCG AAATCACTCG GCTATTTGAA
TCCTATGGTG TCGAGCCTCC GCTAAATCTC ACCGAATCGC CCACCACTCA CTAA
 
Protein sequence
MRLILIIVIS CLFLPQARAE TSAVVWQAHC RDRHPVIYFE NGECKGPGAA VINQVITRLG 
HTVNWSNVPW ARTIKVAETG QVDLIPVHSM TPERNNFLDP MLLGYDKRYV YYFALANRQL
EVKNFDELKP YIIGALRGAF YCPQFNDNQN QLKVSFVNDN GQLINMLKAE RIDLAITSEQ
HEMQFFAKDP QLKQMEYVDI SKNGRYFSIP LMSPLHRHAK QVHQIVDDMR TSGEITRLFE
SYGVEPPLNL TESPTTH