| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1143 |
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| Symbol | |
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| ID | 4477856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1348307 |
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| End bp | 1349182 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725694 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_868784 |
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| Protein GI | 117919592 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR02285] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00243654 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTAGGT TCGTTTTTCA GCTTAGCCAT ATCCTGCTGT TATGTATTTT TATTTTCCCC
GCTTTAGGTG TTCCATCTGA GGCCGGAGCG CCCGTTTGCT TAAATCCCCT CAAAGTGGGT
TATAACGATT GGCCGCCCTA TGCCTGGGAA GATCCACAGG GGGAGGCGCA GGGGTTAGAT
GTGGAGCTGC TTCGCGCCTT TGCCGAACAC TTAGGCTGCG AGGTCACTTT TATCAATGTG
CCGGCGAAGC GCTCGCATCA AATGCTGAAA AGTGGCTCCT TAGACATGAT GATGGGCGCC
ACTAAAACCG CTGAGCGTGA AGAGTATGCC TTATTTTCCG CCGCCTACCG TGATGAAACC
GTGCGTTTAT TTGTATTGGA TGAAAACAAA GACAAGATCC GCTTAACCCA GTGGCAGGAT
ATTTTTAGCC AAAAACTGCG TTTGTTAGTG CCTATCAGTG GTTGGTATGG GGTGGATTAT
GAGCGGACAC GGCAGCGCTT GGAGCAAGAG CATCTGTTGA TACTCAGTCC CGATGCCGAT
AAGTCGGTGC AAATGCTCAC CTATGGCCGT GCGGATCTGA TTATTGGTGA TGCCATGGCC
ATGCCTTATA TCGCCAGTCA GCATCAAGGG GTGAGGTTAT CACCGCTAAA GCCAGTGTTG
GACCGCAACC AAATTCACTT AATGCTCAGC AAGCAAACCC TTTCATCAGC GCAATTAAAG
CAATTTAATG CTGCAATTAA GGCGTTAAGT ACTAACGGTG AAATAGCCCG AATTGTATAT
AAATGGCAGC AAATTTCGTT GGCGCAGCAA ACGAAAACCA GTCATCAGTT TAATTCGCTC
TCCGTGCAAT ATGCCGACTT ACTCACCCTC GATTAG
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| Protein sequence | MPRFVFQLSH ILLLCIFIFP ALGVPSEAGA PVCLNPLKVG YNDWPPYAWE DPQGEAQGLD
VELLRAFAEH LGCEVTFINV PAKRSHQMLK SGSLDMMMGA TKTAEREEYA LFSAAYRDET
VRLFVLDENK DKIRLTQWQD IFSQKLRLLV PISGWYGVDY ERTRQRLEQE HLLILSPDAD
KSVQMLTYGR ADLIIGDAMA MPYIASQHQG VRLSPLKPVL DRNQIHLMLS KQTLSSAQLK
QFNAAIKALS TNGEIARIVY KWQQISLAQQ TKTSHQFNSL SVQYADLLTL D
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