Gene Sbal195_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0482 
Symbol 
ID5752199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp552147 
End bp552923 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content47% 
IMG OID641286744 
Producthypothetical protein 
Protein accessionYP_001552920 
Protein GI160873604 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTGA TACTGATAAT CGTCATTTCA TGCTTATTTC TGCCCCAAGC GAGAGCAGAA 
ACCTCTGCTA TTGTCTGGCA AGCACACTGC CGCGATAGGC ATCCTGTTAT TTATTTCGAA
AATGGTGAGT GCAAAGGCCC AGGTGCTGCG GTGATCAATC AAGTTATCAC CCGTCTAGGT
CACAAGGTAA ATTGGAGTAA TGTGCCTTGG GCACGCACGA TAAAAGTCGC CGAAACGGGA
CAAGTCGACC TCATTCCCGT CCATTCGATG ACACCCGAGC GCAACGATTT TCTGGACCCT
ATGCTACTGG GCTACGACAA GCGCTACGTC TATTACTTTG CCCTTACGAA TCGACAGCTT
GAGGCCAAAA ATTTCGATGA ATTAAAGCCT TATATCATTG GCGCACTCAG AGGCGCTTTT
TACTGTCCGC AGTTCAATGA CAATCAAAAC CAACTAAAAG TGTCTTTTGT TAATGATAAC
GGTCAGTTAA TCAATATGTT GAAGGCTGGA CGTATCGATT TAGCCATCAC CTCTGAACAA
CATGAAATGC AATTCTTTGC TAACGATCCC CAGCTTAAGC AAATGGAATA CGTCGACATC
AGCAAGAACG GTCGCTATTT CAGCATTCCG CTCATGTCGC CGCTGCATCA ATATGCCAAG
CAAGTTCACC AGATAGTCGA CGACATGCGC ACCTCAGGCG AAATCACTCG GCTATTTGAA
TCCTATGGTG TCGAGCCTCC GCTTAATCTC ACTGAATCGC CCTTAGCGAC TCACTGA
 
Protein sequence
MRLILIIVIS CLFLPQARAE TSAIVWQAHC RDRHPVIYFE NGECKGPGAA VINQVITRLG 
HKVNWSNVPW ARTIKVAETG QVDLIPVHSM TPERNDFLDP MLLGYDKRYV YYFALTNRQL
EAKNFDELKP YIIGALRGAF YCPQFNDNQN QLKVSFVNDN GQLINMLKAG RIDLAITSEQ
HEMQFFANDP QLKQMEYVDI SKNGRYFSIP LMSPLHQYAK QVHQIVDDMR TSGEITRLFE
SYGVEPPLNL TESPLATH