59 homologs were found in PanDaTox collection
for query gene Reut_C6348 on replicon NC_007336
Organism: Ralstonia eutropha JMP134



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007336  Reut_C6348  hypothetical protein  100 
 
 
83 aa  173  8e-43  Ralstonia eutropha JMP134  Bacteria  hitchhiker  0.00180642  n/a   
 
 
-
 
NC_007336  Reut_C6383  hypothetical protein  85.39 
 
 
91 aa  138  1.9999999999999998e-32  Ralstonia eutropha JMP134  Bacteria  normal  0.621443  n/a   
 
 
-
 
NC_007347  Reut_A1172  putative DNA-binding protein H-NS  84.09 
 
 
122 aa  134  4e-31  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012855  Rpic12D_5064  hypothetical protein  61.54 
 
 
95 aa  102  2e-21  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS02370  hypothetical protein  61.04 
 
 
83 aa  90.5  7e-18  Ralstonia solanacearum GMI1000  Bacteria  normal  0.14298  normal  0.0406002 
 
 
-
 
NC_010682  Rpic_1142  histone family protein nucleoid-structuring protein H-NS  57.69 
 
 
95 aa  89.7  1e-17  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4462  histone-like nucleoid-structuring protein H-NS  45.36 
 
 
99 aa  86.3  1e-16  Cupriavidus metallidurans CH34  Bacteria  normal  0.168905  normal  0.0423453 
 
 
-
 
NC_007348  Reut_B3959  hypothetical protein  45.54 
 
 
108 aa  83.2  0.000000000000001  Ralstonia eutropha JMP134  Bacteria  normal  0.0572114  n/a   
 
 
-
 
NC_012857  Rpic12D_4404  hypothetical protein  54.43 
 
 
89 aa  75.5  0.0000000000002  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4294  hypothetical protein  54.43 
 
 
89 aa  75.5  0.0000000000002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3930  hypothetical protein  41.33 
 
 
85 aa  66.2  0.0000000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2777  hypothetical protein  42.67 
 
 
87 aa  65.1  0.0000000003  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.0000000000000199644  normal 
 
 
-
 
NC_010623  Bphy_3892  hypothetical protein  43.42 
 
 
84 aa  63.9  0.0000000008  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5701  hypothetical protein  40.26 
 
 
108 aa  63.2  0.000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1018  hypothetical protein  39.74 
 
 
110 aa  62.8  0.000000002  Burkholderia xenovorans LB400  Bacteria  normal  0.0697598  normal  0.0957494 
 
 
-
 
NC_010625  Bphy_6773  histone family protein nucleoid-structuring protein H-NS  40.26 
 
 
112 aa  59.3  0.00000002  Burkholderia phymatum STM815  Bacteria  hitchhiker  0.00017117  normal  0.0671695 
 
 
-
 
NC_010676  Bphyt_6763  hypothetical protein  38.67 
 
 
87 aa  57  0.00000008  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0430903  normal  0.248334 
 
 
-
 
NC_010623  Bphy_4587  histone family protein nucleoid-structuring protein H-NS  37.18 
 
 
112 aa  56.6  0.0000001  Burkholderia phymatum STM815  Bacteria  normal  normal  0.918729 
 
 
-
 
NC_007951  Bxe_A2592  hypothetical protein  36.11 
 
 
97 aa  54.3  0.0000005  Burkholderia xenovorans LB400  Bacteria  normal  0.658103  normal 
 
 
-
 
NC_010676  Bphyt_4222  hypothetical protein  36.36 
 
 
108 aa  53.9  0.0000007  Burkholderia phytofirmans PsJN  Bacteria  normal  0.804885  normal 
 
 
-
 
NC_007348  Reut_B5596  nucleoid protein H-NS  38.46 
 
 
102 aa  52.8  0.000002  Ralstonia eutropha JMP134  Bacteria  normal  0.16143  n/a   
 
 
-
 
NC_003296  RS02604  putative HNS-like transcription regulator protein  33.33 
 
 
102 aa  52  0.000003  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.00414449  normal  0.0842767 
 
 
-
 
NC_007974  Rmet_3677  histone-like nucleoid-structuring protein H-NS  37.18 
 
 
102 aa  51.2  0.000005  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.166379 
 
 
-
 
NC_010622  Bphy_2172  histone family protein nucleoid-structuring protein H-NS  35.06 
 
 
108 aa  50.8  0.000007  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00000970391 
 
 
-
 
NC_009438  Sputcn32_2512  histone family protein nucleoid-structuring protein H-NS  33.77 
 
 
130 aa  50.1  0.00001  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00123836  n/a   
 
 
-
 
NC_010524  Lcho_2290  histone family protein nucleoid-structuring protein H-NS  35.29 
 
 
112 aa  48.9  0.00002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009831  Ssed_1444  histone family protein nucleoid-structuring protein H-NS  32.1 
 
 
130 aa  48.5  0.00003  Shewanella sediminis HAW-EB3  Bacteria  normal  0.292783  normal 
 
 
-
 
NC_011060  Ppha_1064  histone-like nucleoid-structuring protein H-NS  32.05 
 
 
101 aa  47.8  0.00005  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2585  histone family protein nucleoid-structuring protein H-NS  33.73 
 
 
130 aa  47.8  0.00005  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000212728  normal 
 
 
-
 
NC_008825  Mpe_A1370  nucleoid protein H-NS  33.72 
 
 
115 aa  47.8  0.00005  Methylibium petroleiphilum PM1  Bacteria  normal  0.620152  normal 
 
 
-
 
NC_012857  Rpic12D_4348  histone family protein nucleoid-structuring protein H-NS  36.25 
 
 
102 aa  47.4  0.00006  Ralstonia pickettii 12D  Bacteria  normal  normal  0.513312 
 
 
-
 
NC_010678  Rpic_4238  histone family protein nucleoid-structuring protein H-NS  36.25 
 
 
102 aa  47.4  0.00006  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3237  histone family protein nucleoid-structuring protein H-NS  31.65 
 
 
131 aa  46.2  0.0001  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.602482 
 
 
-
 
NC_008577  Shewana3_1404  histone family protein nucleoid-structuring protein H-NS  32.47 
 
 
130 aa  46.2  0.0001  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000773951  normal  0.9865 
 
 
-
 
NC_008322  Shewmr7_1416  histone family protein nucleoid-structuring protein H-NS  32.47 
 
 
130 aa  45.8  0.0002  Shewanella sp. MR-7  Bacteria  hitchhiker  0.00233677  normal  0.422691 
 
 
-
 
NC_011353  ECH74115_5080  Ler  36.36 
 
 
123 aa  46.2  0.0002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.0343561 
 
 
-
 
NC_008321  Shewmr4_1351  histone family protein nucleoid-structuring protein H-NS  32.47 
 
 
130 aa  46.2  0.0002  Shewanella sp. MR-4  Bacteria  normal  0.0110439  hitchhiker  0.00767889 
 
 
-
 
NC_009901  Spea_2856  histone family protein nucleoid-structuring protein H-NS  30.86 
 
 
130 aa  45.4  0.0002  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4285  histone family protein nucleoid-structuring protein H-NS  39.51 
 
 
97 aa  45.1  0.0003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2848  histone family protein nucleoid-structuring protein H-NS  31.17 
 
 
130 aa  45.4  0.0003  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000899352  n/a   
 
 
-
 
NC_009665  Shew185_2867  histone family protein nucleoid-structuring protein H-NS  31.17 
 
 
130 aa  45.4  0.0003  Shewanella baltica OS185  Bacteria  hitchhiker  0.00308675  n/a   
 
 
-
 
NC_011663  Sbal223_1510  histone family protein nucleoid-structuring protein H-NS  31.17 
 
 
130 aa  45.4  0.0003  Shewanella baltica OS223  Bacteria  decreased coverage  0.000161891  normal 
 
 
-
 
NC_009997  Sbal195_2996  histone family protein nucleoid-structuring protein H-NS  31.17 
 
 
130 aa  45.4  0.0003  Shewanella baltica OS195  Bacteria  normal  0.18601  normal 
 
 
-
 
NC_010625  Bphy_6195  hypothetical protein  40 
 
 
84 aa  44.7  0.0004  Burkholderia phymatum STM815  Bacteria  normal  0.170725  normal  0.0606924 
 
 
-
 
NC_004347  SO_3146  H-NS family DNA-binding protein  31.17 
 
 
130 aa  45.1  0.0004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010622  Bphy_0116  histone family protein nucleoid-structuring protein H-NS  37.97 
 
 
100 aa  43.9  0.0009  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1795  histone family protein nucleoid-structuring protein H-NS  32.1 
 
 
114 aa  43.1  0.001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012855  Rpic12D_4934  histone family protein nucleoid-structuring protein H-NS  31.17 
 
 
103 aa  43.5  0.001  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011668  Sbal223_4476  histone family protein nucleoid-structuring protein H-NS  31.17 
 
 
132 aa  42.7  0.002  Shewanella baltica OS223  Bacteria  hitchhiker  0.00112117  normal  0.570223 
 
 
-
 
NC_012849  Rpic12D_5155  histone family protein nucleoid-structuring protein H-NS  38.03 
 
 
97 aa  42.4  0.002  Ralstonia pickettii 12D  Bacteria  normal  0.336859  normal  0.425922 
 
 
-
 
NC_007802  Jann_0798  histone-like nucleoid-structuring protein H-NS  28.4 
 
 
119 aa  42.7  0.002  Jannaschia sp. CCS1  Bacteria  normal  0.835916  normal 
 
 
-
 
NC_008345  Sfri_2749  histone family protein nucleoid-structuring protein H-NS  28.74 
 
 
136 aa  42.4  0.002  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.000604606  n/a   
 
 
-
 
NC_007951  Bxe_A0112  HNS-like transcriptional regulator  32.1 
 
 
100 aa  42  0.003  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.00000000000000994611  normal 
 
 
-
 
NC_010682  Rpic_1730  histone family protein nucleoid-structuring protein H-NS  36.62 
 
 
72 aa  41.6  0.004  Ralstonia pickettii 12J  Bacteria  normal  0.386763  normal  0.64236 
 
 
-
 
NC_007952  Bxe_B2975  putative H-NS-like transcription regulator  37.18 
 
 
96 aa  41.2  0.005  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3822  histone family protein nucleoid-structuring protein H-NS  30.86 
 
 
100 aa  41.2  0.005  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000137841  normal 
 
 
-
 
NC_010676  Bphyt_6934  histone family protein nucleoid-structuring protein H-NS  41.54 
 
 
96 aa  41.2  0.005  Burkholderia phytofirmans PsJN  Bacteria  normal  0.909068  normal 
 
 
-
 
NC_010084  Bmul_0190  histone family protein nucleoid-structuring protein H-NS  33.33 
 
 
97 aa  40.8  0.006  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.317548  hitchhiker  0.0000000190695 
 
 
-
 
NC_010622  Bphy_2981  histone family protein nucleoid-structuring protein H-NS  31.25 
 
 
100 aa  40.8  0.006  Burkholderia phymatum STM815  Bacteria  normal  0.207499  decreased coverage  0.0000000417224 
 
 
-
 
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