Gene Shewmr4_1351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1351 
Symbol 
ID4251370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1567031 
End bp1567423 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content43% 
IMG OID638117935 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_733486 
Protein GI113969693 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0110439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00767889 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGAAT TTTTAGAGAT ATTAACTCAC GGTCGTCGTT TTAAAGCTGC GGTAAAAGAT 
CTCAGCGTTG AAGAACTGCG TGATTTAGCG GCTAAGCTAG ATAAAATTTT AGTTGAGCGT
GAGTCAATGG AGGCAGAAGA ACAGCAAGCT ATTGCTGCGC GTAATGCCAA AATCGAAGAA
ATCCGCCAAC AAATGGAAGC AGTTGGTTTA TCAATCGACG ACTTAGGTGG CGTAGCAGTT
AAAGCTGCAG GTAAAAAACG CGCTCCACGT CCAGCAAAAT ACCAAATTGA AGTTAACGGC
GAAGTGATCC AGTGGACTGG TCAAGGTCGT ATGCCAACGG TATTTAAGAA CGAAGTCAAT
AAAGGCCGTT CTATGGATGA TTTCTTAATC TAA
 
Protein sequence
MSEFLEILTH GRRFKAAVKD LSVEELRDLA AKLDKILVER ESMEAEEQQA IAARNAKIEE 
IRQQMEAVGL SIDDLGGVAV KAAGKKRAPR PAKYQIEVNG EVIQWTGQGR MPTVFKNEVN
KGRSMDDFLI