Gene Swoo_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3237 
Symbol 
ID6117556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3965722 
End bp3966117 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content41% 
IMG OID641634781 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_001761602 
Protein GI170727576 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.602482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATT TTCTTGAAAT ACTAACTCAC GGCCGTCGTT TTAAAGCGGC AGTAAAAGAA 
TTATCTATTG ATGATTTAAA TGAATTAGCT GGTAAGCTTG AAAAGATTAT CTCTGAAAGA
GTTTCTCAAG CTGAAGCTGA AACAGCAGCG ATGGCTGAGC GTAATGCTAA AATTGATGAG
ATCCGTAAGC AGATGGAAGC AGTTGGCTTA TCTGTTGATG ATCTAGGTGC TACAGCAGTA
AAATCTGCAC CTAAAAAGCG TGCTCCACGC CCGGCTAAAT ACACTATTGT TGATGTGAAT
GGTGAAACCA TCACATGGAC TGGCCAGGGA CGTATGCCGA CAGTATTTAA AAATGAGTTA
GATAAAGGTC GCAGCATGGA CGACTTCCTA ATCTAA
 
Protein sequence
MSDFLEILTH GRRFKAAVKE LSIDDLNELA GKLEKIISER VSQAEAETAA MAERNAKIDE 
IRKQMEAVGL SVDDLGATAV KSAPKKRAPR PAKYTIVDVN GETITWTGQG RMPTVFKNEL
DKGRSMDDFL I