Gene Bphy_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2172 
Symbol 
ID6243658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2434791 
End bp2435117 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content66% 
IMG OID642593963 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_001858393 
Protein GI186476923 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00000970391 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACGAAC GAAAGCGCGA CAGCATGATT GCGTATCTGC GCCGCCGCAT GGCGCAAGTC 
GGCATCAAGG CAACCGATCT CGCCGCCGCA CTCGCGCAAG AGCGCCGCGC CAGGAAGGCT
GTGCGTTTTC GCAGCGCATC CGGCGAGACG TGGGACGGCA AGGGCGCGAT GCCGCAATGG
CTCAGCAACG CCGTCAGCGC GGGCCAATCG GCGCAACACT TCGCGATCGA CAAGCCTGCG
AAAGCAGCAA AAGAAGAACG CCGTGGCGTC GACTGGCGCA ACGACCCGTT TGCCGGCACG
CGGCTGGCGA CGGTGCCCGT GCAGTAA
 
Protein sequence
MDERKRDSMI AYLRRRMAQV GIKATDLAAA LAQERRARKA VRFRSASGET WDGKGAMPQW 
LSNAVSAGQS AQHFAIDKPA KAAKEERRGV DWRNDPFAGT RLATVPVQ